Gossypium raimondii: 105800156
Help
Entry
105800156 CDS
T04129
Name
(RefSeq) starch synthase 1, chloroplastic/amyloplastic
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
gra
Gossypium raimondii
Pathway
gra00500
Starch and sucrose metabolism
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Module
gra_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
105800156
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gra01003
]
105800156
Enzymes [BR:
gra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
105800156
Glycosyltransferases [BR:
gra01003
]
Polysaccharide
Storage polysaccharide
105800156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_trans_1_4
Glycos_transf_1
GT4-conflict
Motif
Other DBs
NCBI-GeneID:
105800156
NCBI-ProteinID:
XP_012486551
UniProt:
A0A0D2NVL5
LinkDB
All DBs
Position
9:44726622..44731945
Genome browser
AA seq
656 aa
AA seq
DB search
MESLQVTRLMSCKLSANISHKACSFRPSRQLGFSSLSRRSFQNGKLTVARSDITANGGGF
GGLDDSSNSNSIEEEDDDEEEEEENGLMLGLDRDDCGSVIALHLIPPSGEVTIDSHQDEA
ADTKGEDEGIEEEKGGEEEIRSRVTYNIVFVTAEAAPYSKTGGLGDVCGSLPGVLAGCGH
RVMVVSPRYLNGTSADKNFAGAYDVDRHIKVPCFGGEQEVAFFHEYKKGVDWVFVDHPSF
HRPGNLYGDSHGAFGDNQFRFTLLCHAACEAPLVLPLGGYTYGEKCLFLVNDWHAGLVPV
LLASKYRPFGIYKDARSILVIHNLAHQGVEPAASFKNLGLPWEWYGALEWVFPTWARTHA
LDTGEAVNILKGAIVTADRILTVSKGYAWEITTVEGGHGLNELLSSRRIVLNGIVNGIDV
TEWDSSSDEHISFHYSADDLSGKARCKTALQQELGLPIRPECPLIGFIGRLDYQKGIDLI
RWAIPELMEENVQFVMLGSGDPLYEDWMRAAEKTYRDKFRGWVGFNVPISHRITAGCDIL
LMPSRFEPCGLNQLFAMRYGTVPVVHATGGLRDTVENFNPYAGDRSGEGTGWTFSPLTKE
SMLEALRTAIMTYRDHKSTWEALMRRGMQRDFTWETAAIHYEQVFEWAYIDPPYIT
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggagtctctgcaagtaactcgtctaatgtcttgcaaattatcagccaacatatcgcat
aaagcttgcagttttagaccgagtaggcaactgggttttagttctttgtcgagaaggagc
ttccaaaacggaaagttgacggttgcgagatcggatataactgcaaatggaggtgggttc
ggcggtttagacgatagctctaactccaattccattgaagaagaagatgacgatgaagaa
gaagaagaagagaatggtcttatgctaggtttagacagggatgattgtggttctgttatt
gccttgcatttgattcctccttctggtgaagtcaccattgactctcaccaagatgaggct
gccgatactaaaggcgaagatgagggaattgaagaagaaaaaggaggagaagaagaaatc
cgaagcagagtaacctataacatcgtgtttgttactgctgaagccgcaccgtattcaaag
actggcggtttaggagatgtttgcggttctttgccgggcgtgctggctggctgcggacat
cgagtcatggttgtttctcctagatacctcaacggaacgtccgccgacaaaaatttcgct
ggtgcttatgatgttgatcgccacattaaggtaccttgcttcggaggggagcaagaggtt
gcattcttccatgagtataagaagggtgttgattgggtatttgtggaccatccttcattc
catagacctggaaatctatatggtgatagtcatggtgcttttggtgataatcagtttcgg
tttactttactttgccatgcagcatgtgaagctcccttagtgcttccattgggagggtat
acctatggcgagaagtgtctcttccttgtcaatgattggcatgccggtctagtccccgtg
cttttggcttccaaataccgtccttttggaatttataaggatgctcggagcatccttgta
attcataaccttgcacatcagggagtggaacctgcagcaagctttaagaacttgggactg
ccgtgggagtggtatggggcattggaatgggtgtttcctacatgggcaaggacgcatgct
ctcgacacaggggaagccgtcaatattttaaagggtgcaatcgtgacagcagatcgaata
cttacagttagcaagggctatgcatgggaaataacaacggttgaaggtggacatggttta
aacgagctattaagcagtcgaaggattgttcttaatggaattgtgaacggcattgatgtt
acggaatgggattcgtcttcagatgagcacatcagtttccattattccgctgatgatctc
tccggcaaggctcgatgcaagactgctcttcaacaggaactaggccttccaattaggcct
gaatgccccttgattggatttatagggagactggactatcagaaaggcattgacctaatc
cgttgggcgattcccgagcttatggaagaaaatgtacaattcgtaatgcttggctctggg
gaccctctctatgaagactggatgagagcagcagagaaaacttacagagataaatttcgc
ggttgggtcggatttaatgttcccatttctcatcggattactgcaggctgtgacatactg
ttgatgccttcaagattcgaaccttgcggattaaatcaattgtttgcaatgagatatggt
actgtaccagtagttcatgccacaggaggacttagagacactgtagagaatttcaatccg
tatgctggagatcgtagcggggaaggcacagggtggactttttctccccttacaaaagag
agtatgctggaggcattaagaacagctataatgacataccgagaccacaagtcaacatgg
gaagcattgatgagaagaggtatgcaaagagacttcacctgggaaactgctgccattcat
tacgagcaggttttcgaatgggcttatatcgatccgccgtatattacttga
DBGET
integrated database retrieval system
