Gossypium raimondii: 105800163
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Entry
105800163 CDS
T04129
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105800163
03036 Chromosome and associated proteins [BR:
gra03036
]
105800163
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105800163
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105800163
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
105800163
microRNA pathway
RISC loading complex
105800163
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Reo_sigmaC
Motif
Other DBs
NCBI-GeneID:
105800163
NCBI-ProteinID:
XP_012486561
UniProt:
A0A0D2PTX6
LinkDB
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Position
7:18199707..18207174
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AA seq
898 aa
AA seq
DB search
MEKASTEEALELPSLPLPLPTIPSNVKLESLKPPKYSIVSRREVGTSGRKISLLANHFKV
SVNAPDAVFYQYTVTVLSEDSRVVESKRIGRKLVDKLYQTYSSELAGKRFAYDGEKSLYT
VGPLPQNKFEFTIVLEDSFAKWSPDADGGPAETGKRTKRSFQSKTYKVELSYSAKIPLKS
ISLALKGVQSDDSTQDALRVLDIILRQQAADRGCLLVRQSFFQDDSRNYVDLGGGVLGLR
GFHSSFRPTQGGLSLNMDVSTTMILRPGPVFEFLKQNLNLNDERFWLKARRMLKNMRIKT
RHRNMEFKITGLSEKPCCELFFPMKVKNGGCGEVRTVEITVYEYFTKHCGIELTYSADMP
CLDVGKPKRPNYLPLELCSLVSLQRYTKALTTNQRATLVERSRQKPRERIQILTDALKNN
KFNENPVLSACEISIGRQLTEVEGRILETPRLKVGNHEDCIPRNGRWNYNNKRFLDPKKI
ERWIAVNFSARCDLSQISRDLISCARNKGIEMERPHTLIEEERHQAAKAGPAARVEAMFD
QIIAKLPGPPEFILCVLPVRKNSDIYGPWKKKCLCDMGIATQCISPGKINDQYLTNVLLK
INSKLGGINSLLEIEKPSILPLLKDTPTLILGMDVSHGSPGRSDVPSIAAVVGSLHWPLI
SRYRASVRTQSPKMEMIEALYKPSPDGKVDDGIIRELLVDFYKTSGNRKPKQIIIFRDGV
SESQFNQVLNIELEQIIKSYQFLGESDVPKFTVVVAQKNHHTKLFQANAPENVPPGTVVD
TKIVHPRNYDFYMSAHAGMIGTSRPAHYHVLLDEIGFSPNDLQNLIHCLSYVYQRSTAAV
SIVAPICYAHLAAYQMGQFLKLDELSETSSGNVTSTGSILVPDLPRLKKNVASTMFFC
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagcaagtactgaagaggcactagaattaccatctctgcccctaccactgcca
acaataccatccaatgtgaagctagagagcttgaagcctcccaagtattctattgtcagt
aggagagaagttgggacgagtggacgaaagatatccctgcttgccaaccacttcaaagtt
tctgtcaatgccccagatgctgtattttaccagtatactgttacagttttgtcagaagat
agtagagttgttgaaagcaagaggattgggagaaaacttgttgataaactttatcaaaca
tactcttcggaacttgctggaaaaagatttgcctatgatggggaaaagagtttgtataca
gtgggtcctttgccacagaacaagtttgaatttacaatagtgctagaagactcatttgca
aaatggagtcctgatgctgatggaggccctgctgagactggcaagaggacaaagcgttct
tttcagtcaaagacttacaaagtggaactaagctattctgctaagatacccttgaagtca
atatctcttgccctcaaaggagttcagtcagatgatagcactcaggatgctttgagagta
cttgacatcattctaaggcagcaagctgctgatcgaggttgccttttggtgagacaatca
ttctttcaagatgattcaaggaattatgttgatttgggaggaggggtattgggtctgcgg
ggcttccattccagttttcgtcccactcaggggggcttgtctttgaatatggatgtatct
acaacaatgattttaaggcctggaccagtatttgagtttctaaaacaaaacctgaatcta
aatgatgaacgtttctggctgaaagccagacgaatgttgaagaatatgaggattaaaaca
agacaccgtaacatggaattcaaaatcactggtctaagtgagaagccctgttgtgagcta
ttcttcccaatgaaagttaaaaatggtggttgtggtgaagtccggactgttgagatcaca
gtgtatgagtatttcaccaaacactgtggaattgaactcacatattctgcagacatgcca
tgccttgatgttggtaaaccaaaacgtcctaactatttacccctagagctctgttcactt
gtttcacttcagcggtacacaaaagcgttaactacaaatcaaagggcgaccctggttgaa
agatccaggcaaaagcctcgggaaagaattcaaattctgactgatgctttgaaaaacaac
aaattcaatgagaaccctgtactttctgcatgtgaaatttcaataggtaggcaattgaca
gaagttgagggtcggatcctggagactccaaggttgaaggttgggaatcacgaggattgc
atccctcgaaatggtagatggaactataacaacaagagatttctggatccaaagaaaatt
gaacgttggattgctgtcaacttctctgctcgctgtgatctcagtcaaatttcaagggat
ttaatcagttgtgcaagaaacaagggcattgaaatggaacgtccgcacacattgattgag
gaggaacggcatcaagctgctaaagctggccctgctgctagagtggaagcaatgtttgat
cagattatagcaaagcttcctggcccccctgagttcattctttgtgtcttgccagtgaga
aaaaactctgatatatatggaccttggaagaaaaaatgtctttgcgatatgggaattgcc
acacaatgcattagccctggaaaaattaatgaccaatacctcacaaatgtcctccttaaa
atcaattcaaagcttggaggaatcaactctttattggaaatagagaaaccttcaatcctc
ccattgctgaaggatactcctacattgattttgggaatggatgtctctcatgggtcccct
ggtcgatcagatgtcccatcaatagctgcagttgttggttcgctccattggcctttgatt
tcaaggtacagagcatctgtgagaacacaatctccaaagatggagatgattgaagcttta
tataagccatcaccagacggaaaggttgatgatggtattatcagggaactgcttgttgat
ttctataaaacgagcggtaatcgcaaaccaaaacaaattatcatcttcagggatggagta
agtgaatcacagtttaaccaagtattaaacattgagctggagcaaatcatcaagtcatat
cagtttctgggcgagtctgatgttcccaagttcacagtagtcgttgctcagaagaatcat
catacaaaattattccaagctaatgcccctgaaaatgttccaccagggacagtagtggac
acaaaaattgtgcatccgagaaactatgatttctacatgtctgctcatgcagggatgatc
ggaacatctaggccagctcattatcatgtcttgcttgatgagataggtttctctcctaat
gacctgcagaatcttatccactgtctttcctatgtataccaaaggagcacagcagcagtc
tcaatagtggctcctatttgttatgctcaccttgcggcatatcagatgggccaatttttg
aagctggatgaactttcagaaacatcttcaggaaacgtaacatccacaggaagtatcctt
gtgccagaccttccgaggctgaaaaagaatgtggcaagtacaatgttcttctgttga
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