Gossypium raimondii: 105800175
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Entry
105800175 CDS
T04129
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105800175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105800175
Spliceosome [BR:
gra03041
]
Common components
Common spliceosomal components
SR proteins
105800175
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RSRP
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
105800175
NCBI-ProteinID:
XP_012486594
UniProt:
A0A0D2QDN0
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Position
9:44862689..44866977
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AA seq
253 aa
AA seq
DB search
MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPPRPPCYCFVEFDNSRDAED
AIRGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGGAAKFGVSRHSEYRVIVRGLPSS
ASWQDLKDHMRKAGDVCFAEISRDSDGTFGIVDYTSYDDMKYAIRKLDDTEFRNPWARAY
IRVKRYESSPSRSRSRSRSIRRDRSRSRERSATKSPVKSRSASPVKSPRARSRSRSKSRS
RSGSPEKAQPVSD
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgcttctctcgcacaatctatgttggcaacctaccctctgatatcagagaa
tgggaggtcgaagatctattctacaagtatggtcgtattttggatatcgaattgaagatc
ccgccacgccctccatgttattgttttgttgagtttgacaattcaagggatgctgaagac
gcaattaggggtcgagatggttacaactttgatgggtgtcgtttgagggttgagcttgct
catggtggtagaggacaatcctcaagtgatcgtcggggtggatatggagggggtgcagct
aaatttggagtctcacgccattctgaatatcgagttattgtccgtgggctcccctcttct
gcttcctggcaagatttgaaggatcacatgcgaaaagctggtgatgtgtgttttgccgaa
atttcgcgtgacagtgatggaacttttggtattgttgattataccagttatgatgacatg
aaatatgccatccgcaaacttgatgacaccgagtttagaaatccttgggcaagggcttat
attcgggtgaagagatatgagagcagtccatccaggagccgaagtagaagccgcagcatt
agaagagatcggagtagatcaagggaacggtccgcaaccaaatctccagttaaatccaga
tctgcctcccctgttaagtcacccagagcaagatcgagatcaaggtcaaagtcaaggtca
aggtcaggatctccagaaaaggcccaaccggttagcgactga
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