Gossypium raimondii: 105800239
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Entry
105800239 CDS
T04129
Name
(RefSeq) RNA-binding NOB1-like protein
KO
K11883
RNA-binding protein NOB1
Organism
gra
Gossypium raimondii
Pathway
gra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105800239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105800239
03051 Proteasome [BR:
gra03051
]
105800239
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
105800239
Proteasome [BR:
gra03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
105800239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
105800239
NCBI-ProteinID:
XP_012486696
UniProt:
A0A0D2NW66
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Position
9:45364801..45367428
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AA seq
626 aa
AA seq
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MEDSGPPAPNLNPISGWSNVLKSQPPKPHTQSQITATSQIFVESCKSTKGIAVAVVDANA
VIEGGEKLNNITDRFVTVPEVLAEIRDPVSRHRLAFIPFSIDSVEPSPDALNKVIKFARA
TGDLQTLSDVDLKLIALTYTLESQIHGTNHLRDAPPPVHVVNVKRLPERDLPGWGSNVPN
LEEWEALEPETGDGFNSNSRILPLKDLNMNYVSSDNHSEDVLVETKSETHSENREDIDQG
FRRPRRYFPQKEEVKIEGKKMVADGIDASQGHLDDNADDWLPAVSRSTHRRYLRRKARRE
FYEALVEKDCQEDMKKGLEKSNSEDASGCPDRPLQQSAEEVHSGNGIYEEAERAEVDKGD
GDLSSILKQMRLEEDPARTLGEAKEAETTAEEAMLNDSMNLAVEGDSEELDQLEMSSQTN
ETVDASFTDDVSSEQSWMLRSLSESTVACVTGDFAMQNVLLQMGLRLLAPGGMQIRQLHR
WVLKCHACYTVTAEIGRIFCPKCGNGGTLRKVAVTVGENGIVLASHRPRITLRGTKFSLP
LPQGGRDAITKNLILREDQLPQKFLYPKTKKKVNKQGDDDLFMAGDTFTHHTDKRAPLQP
PVRKALAVFSGKRNPNDNHYSRSKQK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggaggactccggacccccggccccaaacctaaatccgatatcgggttggagcaacgtt
ctgaagagccaaccacctaaacctcatactcaaagccaaattacggcgacaagccaaatc
ttcgttgaaagctgcaaatccacgaagggaatagcggtggctgtagtggacgccaacgcc
gtcatcgaaggtggagaaaagctaaacaacatcactgacaggttcgttaccgtccctgaa
gttctcgcagaaattcgcgaccccgtttcccgccaccgcctagctttcatccctttctcc
atcgattctgtggagccctccccagatgccctaaataaagttatcaaatttgcgagggcg
actggtgacttgcagactctttctgatgttgatctcaaactgattgccttgacttacacc
ttggagtctcaaattcatggaacaaatcatcttagggatgcgcctccccctgttcatgtt
gttaatgtgaagaggctgcctgaaagggacttgcctggatggggctctaatgtccctaat
ttggaagagtgggaagctctcgaaccggaaacaggagatggattcaactctaactcaaga
atccttcccttgaaagacttaaatatgaactatgtctcatcagataaccattccgaagat
gtattggtggaaacaaagagtgaaacacattctgagaatcgagaagatattgaccagggt
tttaggaggcctaggcgctattttccccagaaagaagaggtaaaaatcgaagggaaaaag
atggtggctgatggtattgatgcatctcagggacacttggatgataatgctgatgattgg
ctgcctgcagtaagtcgaagtactcataggagatatcttaggaggaaagctaggcgggaa
ttctacgaggcattagtggagaaagattgtcaagaagatatgaaaaaaggcttagagaag
agcaacagtgaagatgcaagtggttgtcctgatcgaccattgcaacaaagtgccgaagaa
gttcattccggaaatgggatttatgaggaggctgagcgagcagaagttgacaagggtgat
ggagatctttcttcaatcctaaaacaaatgaggctggaagaagatccagcgaggactctt
ggagaagctaaagaagcagaaaccacagcggaggaagctatgttaaatgacagtatgaat
cttgctgttgaaggagatagtgaagaattagaccagttggagatgtcaagtcagaccaat
gaaactgtcgatgcatcattcactgatgatgtgagcagtgaacagagctggatgttgaga
tccttatccgagtccactgtagcttgtgtaacgggggattttgctatgcaaaatgttctt
ctgcagatgggtttacggttactagcaccaggtggaatgcagattcggcagctgcacaga
tgggtactgaaatgccatgcctgctatactgtgactgctgaaattggaagaattttctgt
ccgaagtgtggaaatggtggaacattacgaaaggtagctgttactgttggtgagaatgga
attgttttggcgtcccatcgtccaagaattacattgcgtggtacaaagttttcactgcct
ttaccccaaggtggaagagatgccataaccaaaaacctaattttgcgcgaagatcaactt
ccccaaaagttcctttaccctaaaactaagaagaaagtaaacaaacagggggatgatgat
cttttcatggctggggacaccttcactcaccatactgataaaagagcacctcttcagcct
cctgtaaggaaggcattagcggtctttagcggaaagaggaatccaaacgacaatcattac
tcccggtcgaagcagaagtag
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