Gossypium raimondii: 105800464
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Entry
105800464 CDS
T04129
Name
(RefSeq) sm-like protein LSM36B
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
gra
Gossypium raimondii
Pathway
gra03018
RNA degradation
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105800464
09123 Folding, sorting and degradation
03018 RNA degradation
105800464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105800464
03041 Spliceosome [BR:
gra03041
]
105800464
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105800464
mRNA degradation factors
5'-3' decay
Lsm complex
105800464
Spliceosome [BR:
gra03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
105800464
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105800464
NCBI-ProteinID:
XP_012487075
UniProt:
A0A0D2S8G1
LinkDB
All DBs
Position
9:47044463..47046999
Genome browser
AA seq
91 aa
AA seq
DB search
MSGAGEKGSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTSKRTLADGA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagctggagaaaaagggtcaacaactacaaaaacacctgctgatttcctcaaa
tcaatccgtgggcgacccgttgtcgtcaagctgaattctggtgttgattatagaggtatt
ctagcttgcctagatggatatatgaacatagctatggaacaaacagaagaatatgtcaat
ggacagttaaaaaataaatatggcgatgcttttattcgcggaaataacgtactttatatc
agcacatcaaagaggacattggctgatggggcttaa
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