Gossypium raimondii: 105800628 Help Entry 105800628         CDS       T04129                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism gra  Gossypium raimondii Pathway gra03040   Spliceosome gra04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:gra00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     105800628   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     105800628  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:gra03041]     105800628    04121 Ubiquitin system [BR:gra04121]     105800628    03400 DNA repair and recombination proteins [BR:gra03400]     105800628 Enzymes [BR:gra01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      105800628 Spliceosome [BR:gra03041]  Complex B   Other components    Prp19 complex     105800628  Complex C    Prp19-CDC5 complex     105800628 Ubiquitin system [BR:gra04121]  Ubiquitin ligases (E3)   U-box type E3    105800628 DNA repair and recombination proteins [BR:gra03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     105800628 SSDB OrthologParalogGFIT Motif Pfam:  WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40 Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_Gbeta EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd DSE1_N Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_EIPR1 WDR90_beta-prop_4th CFAP251_N PROPPIN Beta-prop_VPS8 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_Aladin U-box PAC11 ASA1 WDR54 zf-Nse WD40_like Beta-prop_ACSF4 PAS_11 PUMA_CC V_ATPase_I_N Motif Other DBs NCBI-GeneID:  105800628 NCBI-ProteinID:  XP_012487307 UniProt:  A0A0D2T426 LinkDB All DBs Position 9:complement(48361005..48366582) Genome browser AA seq 524 aa AA seqDB search MNCSISGEVPEEPVVSTKSGLLYEKRLIERHISDYGKCPVTGEVLTMDDIVPVKTGKIVK PRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK ERDEARSLLAQAERQAPLPASAATANVSALSNGKRAAESEDMGPGGKRMRPGVSDSIISE LTECNAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDINLSKDIVAT GGVDSSAVLFDRTSGEILSTLNGHSKKVTSVKFVAQNDVFLSGSADKTVRIWQGSEDGKY DCRHILKDHTAEVQAVTVHATNNYFVTASLDTTWCFYDLSSGLCLTQVEDPSNSMGYTSA AFHPDGLILGTGTTGATVRIWDVKSRGNVANFDGHTGAVTAISFSENGYFLATAAHDGVK LWDLRKLKNFRSFELYDQDTPTNSVDFDHSGSYLAIAGSDIRVYQVGSVKAEWNCIKTLP DLSGTGKATCVKFGTDAKYLAVGSMDRNLRIFGLPEGDDASTES NT seq 1575 nt NT seq  +upstreamnt  +downstreamnt atgaactgttcaatctccggtgaggtgccggaggagcccgttgtctccacgaaatccggc ttgctctacgagaaacgcttaatcgagcgtcatatttcggattatgggaagtgtccagtt actggggaggtacttactatggacgacattgtcccggtcaaaaccggcaagattgtgaag cccagatctttaacagcagctagcattcctgggatgcttggaatgtttcagaatgaatgg gatgctttaatgctatccaattttgcattggagcagcagcttcatacagccaggcaagag ttaagtcatgcactctaccagcatgatgctgcctgccgtgtgattgcaagacttaaaaag gaaagggacgaagccaggtcattgctcgcacaggctgagaggcaggcacccttgcctgca tcagcagctactgccaatgtttctgctctcagcaatggaaagagagctgcagagagtgaa gatatgggccctggtggaaagagaatgcgtcctggggtttctgatagtattatttctgag ttaacagaatgtaatgcagctctgtcacaacagcgtaaaaagcgccagatacctcccact ttagctcccattgatgctttggagaggtatacccaactatctagtcatcctcttcacaag accaacaaacctgggatcacttcaattgatatcaatctttcaaaggatattgttgccact ggaggggttgattcaagtgctgtactctttgatcgaacatctggggagatcttatctaca ctcaatgggcattctaagaaggttactagtgtaaaatttgtagcccagaatgatgtattt ttaagtggttcagcagataagactgttcgcatttggcaagggtctgaagatggaaagtat gattgcaggcatattttgaaagatcatacagctgaggtgcaagctgtcacagtccatgcc actaacaactactttgtaactgcttcacttgacacgacgtggtgtttttatgatctttcg tctggtttatgcttgacccaggttgaagacccatcaaattctatgggctatacgtctgca gcttttcatcctgatggccttatccttggaactggcaccactggagctactgttagaatt tgggatgtgaagagtcggggaaatgttgccaactttgatggacacactggggctgtaaca gccatatctttctcagaaaacggttacttccttgcaactgctgctcatgatggtgttaag ttgtgggatctacgcaaattgaagaactttcgatcttttgaattatatgatcaagacaca ccaaccaactcagtggattttgaccatagtgggagttaccttgcaattgctggctcagat ataagagtttaccaagttggcagcgtaaaagctgaatggaattgcatcaaaactttacct gatctgtccggcacaggtaaagcaacttgtgtcaaatttggtacagatgcgaagtacttg gcagtgggatcaatggatcgcaaccttcgcatatttggccttcccgaaggtgatgatgct tcaacagaatcataa

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