Gossypium raimondii: 105800791
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Entry
105800791 CDS
T04129
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
gra
Gossypium raimondii
Pathway
gra00531
Glycosaminoglycan degradation
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
105800791
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gra00536
]
105800791
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
105800791
Glycosaminoglycan binding proteins [BR:
gra00536
]
Heparan sulfate / Heparin
Enzymes
105800791
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
105800791
NCBI-ProteinID:
XP_012487573
UniProt:
A0A0D2T4Z8
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All DBs
Position
9:49478164..49484584
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AA seq
542 aa
AA seq
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MEFGMILIVFVASIPTILAEDISYGTIVVDGTTSIAQTDDNFVCATIDWWPHDKCDYKQC
PWHYTSAITLDLSHPILTKAIQAFNRLRIRIGGSLQDQVLYNVGNLKSPCHPFRKMKHGL
FGFSKGCLQMKRWDELNHFFNATSVMLTFGLNALYGRHKIKGSLWGGEWDSSNAQDFIKY
SFSKGYQIDSWEYGNELSGNGVGAHVHADRYGKDLIHLKKIIKELYRGSQFEPSLVAPGG
FFNQQWFTKLLQVSGSNVLDAISHHIYNLGAGSDPKLVSKILDPNHLNKVANTFINLART
VQTHGPWSSAWVGESGGAYNSGGPHVSDTFVNSFWYLDQLGMASKYHTKVYCRQTLIGGN
YGLLNATTYVPNPDYYSALLWHRLMGKVVLAVGSDASPFLRSYAHCSKGRIGVTLLVINL
SDQTKFITDVQNSMNNNIRLATEQQNISRKSFSRSLKNTASGAEIKASSDEYSYREEYHL
TPKNGYLQTRTMVLNGIPLELTSTGNIPRLDPVRVNVKSPISITPLSIAFLVFPDFVAPA
CR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaatttggcatgattttgatcgtatttgtggcttcaatccctacaattttggctgaa
gatattagttatggaacaattgtagttgatgggactacaagtattgctcaaaccgatgat
aatttcgtttgtgctacaatcgattggtggcctcatgataagtgtgattataagcagtgt
ccgtggcactatacatctgcaataactttggacctgtctcatcctatccttaccaaagca
atccaagctttcaaccgtttgagaatacgaattggagggtctttgcaagatcaagtgttg
tataatgttggaaatttgaagtctccttgccatccattcagaaagatgaaacatgggctg
tttggattttcaaagggatgtttgcagatgaaaaggtgggatgaactaaaccatttcttc
aatgctaccagtgtgatgttgacctttggcttgaatgcactctatgggagacataaaata
aaggggagcctttggggaggggaatgggactctagcaatgcacaagattttatcaagtac
tccttttcaaagggataccagatagattcatgggaatatggtaatgaattgagtggaaat
ggtgttggtgcacatgttcatgctgaccgatacgggaaagatttgatccacctaaagaaa
atcataaaagagttatacagaggctcccaatttgaaccatcattagttgcaccaggagga
ttctttaaccaacaatggttcaccaagcttcttcaggtctctggctcaaatgtacttgat
gctataagccatcacatatacaatttgggtgctggttctgatcccaaacttgtgagtaag
atattggatcctaaccacttgaacaaggttgcaaatactttcatcaatctcgcacgcacc
gtccagacgcatggtccttggtcttccgcatgggtcggagaatccggtggggcttataac
agcggcggtcctcacgtgtctgacacattcgtcaacagcttttggtatttagatcaactt
ggaatggcttccaagtaccatactaaagtatattgtcggcaaacactaattggtggcaac
tatggtcttctcaatgccacaacatatgttccaaaccccgattattacagtgcacttcta
tggcatcgtttgatgggaaaagtggttttagctgttggtagtgatgcatccccctttttg
cgatcttacgcccattgttctaagggaagaattggtgtgactttactcgtgatcaacttg
agtgatcagacgaaattcattacggatgttcaaaacagtatgaacaacaacatcaggttg
gctacagaacaacaaaacatcagcaggaagagcttctcacggagtcttaagaacacagct
tccggagccgaaatcaaagcttcttctgacgaatattcatacagagaagagtatcattta
actccaaaaaatgggtaccttcaaacccgaactatggttcttaatggcattcctttagaa
cttacaagtactggaaacatcccaaggctagaccctgttcgtgttaatgttaagtctccg
atatccatcactccgttgtcgattgccttcctagtattccccgactttgttgctccggct
tgcagataa
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