Gossypium raimondii: 105800848
Help
Entry
105800848 CDS
T04129
Name
(RefSeq) ATP-dependent DNA helicase SRS2-like protein At4g25120
Organism
gra
Gossypium raimondii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
Motif
Other DBs
NCBI-GeneID:
105800848
NCBI-ProteinID:
XP_012487659
UniProt:
A0A0D2NZD6
LinkDB
All DBs
Position
9:49868295..49881823
Genome browser
AA seq
1141 aa
AA seq
DB search
MSKENVNVTPLSHSTSQTWQLKTPRISLNFRAAKPFLDRKRTSDDTYSQRHYPHEYNDGI
ERELPASNTGIKRIALMEMPTNTPRFSTTGYKSINRQHGDFSSARSVAGAIDIGCMSGPF
MTPIKQPAFSNLSDPFLTPSLLDEDFDESIFEEIDAICEHQSAAKAEEEEEDLNVKVNME
RQQNDNINRNDRTATLLFTMNENVRAESAVDTRNYFGLKEEDLCTLGDKQSGNMPDEYSR
YLQSLNDKQREAACSDISIPLMIVAGPGSGKTSTMVGRVLMLLNEGVSPSNILAMTFTTA
AASEMRERICAVAGKARAKELTISTFHSFSLQLCRSHAEKIERTAEFLIYGHGQQRRAII
EAVRLLENEKSGQQHNSCKSSGIENSNGVRHFKDRSKKWQKFVIQAKASGRTPEDCRKMG
DQIGAEVLGNYNDILRSCNALDYHDLIICSVKLLTEYDAVYKECQDSWKAIIVDEFQDTS
ATQYRLLRILASHNHITVVGDDDQSIFSFNGADISGFDSFRKDFTSYKEIRLVRNYRSTR
CIVEAASCLIQNNTKRCPSKNFLSENAYGSKITIKECYNEDAQCAFVVDKILEIASNSTA
GSSSYGNIAILYRRQVTGRVFQTTLRNRKIPFNLHGVAFYRKKVVRAIIAMLKTTLPTCD
DSPYRKVFKALLPLEKEEKKRVIEHVEKITECRKCSFISAACDIFNAKISGTFKRSQLTQ
GRKVLQTLEMISRLVRREQSISAVITSVSNMIPQKYLLEQRAVIDVDGGKLLNEDNDVRS
VLEYLLDDVSDFLSTQSTDRKEKIETGEEKGSVSLLNSFIDYITERERENFRSRRHDNEN
SVTLTTIHQSKGLEWDTVFIVKANETEIPLLHEFNGAATENGTSLEEERRLLYVAMSRAR
QKLFILYVTVDSNWQMLQPSRFLKEIPDHLREIQAEVTRNDLKTTHQVIAKGTERFSMDL
PSKKQSIEADMVQNNFPDAQDGASKETIESVEACNGSNFLKRFGVEERSIISHLFHQWAK
KQAFQEPRRLLDKVRFVIDERLRVKNYKHKEVLRELKPCLSSEEAFQYAEYIVKWEQIPA
DKRAHLMREKQERFQKLRMESSMGSSSATPKQIAYLQSLGCTVIPTSRLHASRLIEQYKS
L
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagaaaacgttaatgtcacgcctctctcgcactccaccagccagacttggcag
ctaaaaacacctcggatctctctgaattttagagctgccaagcctttccttgatcgtaaa
cggactagcgatgatacctattctcagcgccactatcctcacgaatataatgatggaata
gaaagagaattgccagcttcaaatactggcatcaagaggattgctcttatggagatgcct
acgaacactcctcgattttccaccactggatacaagtcaataaatcgtcaacacggcgac
ttttcaagtgccagatcggtagctggtgctatagacatcggatgcatgtctggtcctttt
atgaccccgataaaacaaccagctttctctaatttaagtgatccgtttttgactcctagc
cttctagacgaggattttgatgaatctatatttgaagaaattgatgcaatatgtgaacat
cagtctgcagcaaaagcagaggaggaggaggaggatctgaatgtcaaagtcaacatggaa
cgtcagcaaaatgataatattaacagaaatgatcgcactgctaccttgcttttcactatg
aatgagaatgtcagagcagaaagtgcagttgataccaggaattattttgggttaaaagag
gaggatttatgtactttgggggataaacaaagtgggaatatgcctgatgagtattcaaga
tacttgcaatctttgaatgataaacagcgtgaagcagcttgtagtgatatatctattcct
ttaatgatagttgctggtcctggaagtggaaagacttccacaatggttggtcgtgttctg
atgttgctcaatgagggtgttagtccatcaaacatattggcaatgactttcactacagct
gccgcttctgaaatgagagaacgtatctgtgcagtggctggaaaggctagagctaaggaa
cttacaatcagcacattccattctttctctttacagctgtgtcgttcacatgcagagaag
atagagcgcacagcagagtttctaatatatggacatggacaacaaaggagagcaataatt
gaggcagtgaggttattagaaaatgaaaaaagtggacagcagcataattcctgcaaatcc
tctggaatcgaaaattccaatggtgtgagacattttaaggatagatcaaagaaatggcag
aagtttgtgattcaggcaaaagcttctgggagaactcctgaagactgccgtaaaatgggt
gatcaaataggagctgaagttcttggaaattacaatgacatcttaagatcgtgcaatgct
ttagattatcatgacttaatcatttgctcagtgaagctcctcactgaatatgacgcagtg
tacaaggagtgccaagattcatggaaagccatcatagtagatgaatttcaggataccagt
gcaacacaatatagacttctgaggattcttgcatcccataaccacataacggttgttggt
gatgatgaccagtccattttcagcttcaatggagctgacatttctggttttgattcattt
cgcaaagattttacaagctacaaggagataagacttgtcagaaactatcgctccacgcgt
tgtattgttgaggctgcatcatgtcttattcaaaacaataccaaaagatgcccgtcaaag
aattttctttctgaaaatgcctatggatctaagatcacaatcaaggaatgttacaatgag
gatgcacaatgtgcctttgttgttgacaagatcttggaaattgcgtctaacagtactgct
ggtagttcctcctatggaaatattgcaattctttaccggaggcaggtcacaggaagagtt
tttcaaactaccctccggaataggaaaataccatttaatcttcacggtgtagctttttac
aggaaaaaggtagttagagctattattgctatgcttaaaacaacattgcctacttgtgat
gatagtccctatcgtaaagtgttcaaggctttgcttcctttagaaaaagaggaaaagaag
agggtaattgagcatgtggaaaaaattacagaatgtagaaaatgcagcttcatatcagct
gcctgtgacatctttaatgcaaagatttctggtacctttaagagaagtcaacttacacaa
ggtcgtaaagtgctacagacattggaaatgatatccagacttgttcgcagggaacaatca
atatcagctgttataacttcagtctcaaacatgatacctcagaaataccttcttgaacaa
cgagctgtcatagatgttgatggaggaaaattactcaatgaggacaatgatgtcagatct
gttcttgaatatctacttgatgatgtttctgatttcctgtctactcaatctactgataga
aaagagaagatagagactggcgaagaaaaaggcagtgtcagtttactaaattctttcatt
gactacataactgaacgtgagagagaaaatttccgttctcgaagacatgacaatgaaaat
tcagttaccttgactaccattcatcagtcaaaaggcttagaatgggatacggtcttcata
gtgaaggcaaatgaaacagagattcctctgttacatgagttcaatggtgctgcaaccgaa
aatgggacatcactcgaggaggaacgacgtcttctatatgtggcaatgagccgtgctcgt
caaaagcttttcattctgtatgttacagtggattcaaattggcagatgcttcaaccttca
cgttttcttaaagaaattccagatcatcttcgagaaattcaggctgaagtaaccaggaat
gatttaaaaaccacacatcaagttattgcaaaaggaactgaacgattctccatggatctg
ccaagcaaaaagcaatcaattgaagcagacatggtgcaaaacaatttccctgacgctcaa
gatggagcctcaaaagagactatagaatcagttgaggcctgcaatggaagtaatttttta
aaaaggtttggtgtggaggagagatcaatcatctcccacttattccatcaatgggccaag
aagcaagcctttcaagagcctaggagattgcttgacaaggttcgctttgtaattgacgag
cgtctgagagtcaaaaattataaacacaaggaagttctgcgtgaattaaagccatgtttg
agtagcgaggaagcatttcagtatgcagaatatatagtgaagtgggagcaaattcctgct
gataaacgtgctcacttgatgcgggagaagcaggagcgtttccagaaactaaggatggag
agttcaatgggttcatcatcagcaacgccaaaacagattgcctatctgcaaagtttgggg
tgcaccgttattcctacttcaagacttcatgcttcccgtctgatagaacagtacaaatca
ctgtga
DBGET
integrated database retrieval system
