KEGG   Gossypium raimondii: 105800858
Entry
105800858         CDS       T04129                                 
Name
(RefSeq) splicing factor-like protein 1
  KO
K13095  splicing factor 1
Organism
gra  Gossypium raimondii
Pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105800858
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gra03041]
    105800858
Spliceosome [BR:gra03041]
 Complex A
  Other components
   Complex A specific factors
    105800858
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP RRM_1 KH_1 KH_12 eIF3g zf-CCHC PHD_4 KH_PNO1_2nd RRM_5 zf-CCHC_2
Other DBs
NCBI-GeneID: 105800858
NCBI-ProteinID: XP_012487671
UniProt: A0A0D2T5D1
LinkDB
Position
9:49920484..49926053
AA seq 786 aa
MDSVQTNLNDPQSFSAQTLNSYNQNPPPPPSQTFDSDPVLEHNNANNGALSNPDAHSNTI
NNTYSFKPDIHKPLLSENGLTNTHSGTTDKDYSGGEEETTSRRRRRSRWDPPSNSNNHQT
GNDESASGTKKRKSRWADDEPKPVIQLPDFMKDFTGGIQFDPEIQALNSRLLEISRMLQS
GLPLDDRPEGARSPSPEPIYDNLGIRINTREYRARERLTKERQEIISQILKKNPAFKPPA
DYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQ
QKRDLKPDPAENEDLHVLVEAETQESLDAAAAMVEKLLQPVDEVLNEHKRQQLRELAALN
GTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPMKGTTGKKMDD
EYQNFLAELGGTVPDSANKQNSSSVSSGSNPPWASSTGGAGSAHPGLGSNAVKPPKEYDD
TNLYIGYLPPSLDDDGLISLFSAYGDIVMAKVIKDRVTGLSKGYGFVKYASVDMANNAIK
GMNGSLLEGRTIAVRVAGKPPQPAVPPGPPTLSMPTYPVSSQPVGAYPSRQFTTGGPIPN
AASASYAGNPVPWGPPVPPPPPYAPYAPPPPPPPGSTIYPPVHGQPMPPYGLQYPPQMQT
VPPGVPPPPQPVTSSETAQSFPPGVQSENSTSAPAMPANIYGNSMTAMPPNSQSAYPTSS
LGYSSYYNAVPPPPPPPLPTSSTDNSQSLSNVPWAPNPLLTPAASSGEKTTYGADTEYEK
FMAEMK
NT seq 2361 nt   +upstreamnt  +downstreamnt
atggattctgtccaaacaaatcttaatgatccccaatctttttctgcgcaaaccctaaat
tcatacaaccaaaaccctcctccgcctccatctcagacattcgactccgatcctgtcctt
gaacacaacaacgccaacaacggtgccctgtctaatcccgatgcccattccaatactatt
aacaatacttattcatttaaacccgacatccacaagcctctactgtcggaaaatgggtta
actaacacccatagcggtaccacagacaaggattattctggcggggaagaggagaccacc
agcagaaggcgaaggaggagccgctgggacccgccctccaattccaacaaccaccagaca
ggtaatgatgagtctgcctctggaaccaagaagaggaagtcccggtgggcagatgatgag
cccaagcccgtgattcagctccctgattttatgaaggatttcactggaggtatccaattt
gatcctgagattcaagctttgaatagtaggctgctagagattagtaggatgcttcaatct
ggattgcctttggatgatagacctgagggagctaggtctccttcgcctgaacctatatat
gataatttgggaattaggattaacaccagggaataccgggcaagagagagattgaccaaa
gaacgacaagaaattatatctcagattcttaagaagaatcctgcgtttaagccaccagct
gactataggccaccaaagcttcagaagaagctttatatacccatgaaagaatacccaggt
tacaattttatcggcttgattattgggcctagagggaatacccaaaagaggatggagaag
gaaacgggtgcaaagattgtaattaggggtaaaggttccgtgaaagaaggtaggctgcag
cagaagagagatttgaagcctgatcctgcagagaacgaggacttgcatgttttggttgag
gccgaaacacaagaatcacttgatgctgctgcagcaatggtggaaaagctcttgcagcct
gtagatgaagtattaaatgagcataagaggcaacagttgagggaactcgctgcattgaat
ggaacaataagagatgaagagtattgtaggttgtgtggtgagcctgggcaccgtcaatat
gcatgtccttctcgcacctcaacctttaagagtgatgttttatgtaagatttgtggtgat
ggtgggcatccaacaatcgattgtccaatgaagggaactacagggaagaaaatggatgat
gaatatcagaatttcttggctgagctaggtggtactgtccctgattcagctaacaagcaa
aactcttcgtcagtcagttctggaagcaatcctccttgggctagcagtactggaggtgct
ggaagtgcacaccctggcttaggttccaatgctgttaagccccccaaagaatatgatgat
actaatttgtacattggatacttgcctcccagtcttgatgatgatggtttgattagtttg
ttttcagcttatggtgatattgtgatggcaaaggtaatcaaggaccgggttactggactg
agtaaagggtatggttttgtgaagtatgctagtgttgacatggcaaacaatgctattaag
ggaatgaatggtagtcttctagagggaagaaccattgctgtgagagttgctggcaagcca
ccacaacctgcagtgcctcctggtccacccacattgtcaatgcccacttaccctgtctct
agtcagccagttggtgcctatccatcacgacaatttacaactggaggtcctattcctaat
gctgcttctgctagttatgcaggaaatccagttccatggggaccaccagttcctcctcct
cccccttatgccccttatgcgcctcctccccctcctcctcctggctcaaccatttatcct
cctgttcatggtcagcctatgccaccttatggtttgcaatatcccccacaaatgcagacg
gttcctcctggtgttccacctccacctcaacctgtgacttctagtgaaacagcacaaagt
tttccaccaggagtgcaatctgaaaatagcacctctgccccagctatgccagctaatatc
tacgggaactcaatgactgcaatgcctccaaattcgcaatctgcatatcctacatcttca
ttaggttactcttcttattacaatgcagttcctccccctccccctcctccgctacctaca
tcttccacagataattctcagagccttagtaatgtcccttgggctccaaatcctcttttg
actccggcagcatcctctggagagaaaacaacctatggtgcagatactgagtatgagaag
ttcatggcagagatgaagtga

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