Gossypium raimondii: 105800858
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Entry
105800858 CDS
T04129
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105800858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105800858
Spliceosome [BR:
gra03041
]
Complex A
Other components
Complex A specific factors
105800858
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
PHD_4
KH_PNO1_2nd
RRM_5
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
105800858
NCBI-ProteinID:
XP_012487671
UniProt:
A0A0D2T5D1
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All DBs
Position
9:49920484..49926053
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AA seq
786 aa
AA seq
DB search
MDSVQTNLNDPQSFSAQTLNSYNQNPPPPPSQTFDSDPVLEHNNANNGALSNPDAHSNTI
NNTYSFKPDIHKPLLSENGLTNTHSGTTDKDYSGGEEETTSRRRRRSRWDPPSNSNNHQT
GNDESASGTKKRKSRWADDEPKPVIQLPDFMKDFTGGIQFDPEIQALNSRLLEISRMLQS
GLPLDDRPEGARSPSPEPIYDNLGIRINTREYRARERLTKERQEIISQILKKNPAFKPPA
DYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQ
QKRDLKPDPAENEDLHVLVEAETQESLDAAAAMVEKLLQPVDEVLNEHKRQQLRELAALN
GTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPMKGTTGKKMDD
EYQNFLAELGGTVPDSANKQNSSSVSSGSNPPWASSTGGAGSAHPGLGSNAVKPPKEYDD
TNLYIGYLPPSLDDDGLISLFSAYGDIVMAKVIKDRVTGLSKGYGFVKYASVDMANNAIK
GMNGSLLEGRTIAVRVAGKPPQPAVPPGPPTLSMPTYPVSSQPVGAYPSRQFTTGGPIPN
AASASYAGNPVPWGPPVPPPPPYAPYAPPPPPPPGSTIYPPVHGQPMPPYGLQYPPQMQT
VPPGVPPPPQPVTSSETAQSFPPGVQSENSTSAPAMPANIYGNSMTAMPPNSQSAYPTSS
LGYSSYYNAVPPPPPPPLPTSSTDNSQSLSNVPWAPNPLLTPAASSGEKTTYGADTEYEK
FMAEMK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtccaaacaaatcttaatgatccccaatctttttctgcgcaaaccctaaat
tcatacaaccaaaaccctcctccgcctccatctcagacattcgactccgatcctgtcctt
gaacacaacaacgccaacaacggtgccctgtctaatcccgatgcccattccaatactatt
aacaatacttattcatttaaacccgacatccacaagcctctactgtcggaaaatgggtta
actaacacccatagcggtaccacagacaaggattattctggcggggaagaggagaccacc
agcagaaggcgaaggaggagccgctgggacccgccctccaattccaacaaccaccagaca
ggtaatgatgagtctgcctctggaaccaagaagaggaagtcccggtgggcagatgatgag
cccaagcccgtgattcagctccctgattttatgaaggatttcactggaggtatccaattt
gatcctgagattcaagctttgaatagtaggctgctagagattagtaggatgcttcaatct
ggattgcctttggatgatagacctgagggagctaggtctccttcgcctgaacctatatat
gataatttgggaattaggattaacaccagggaataccgggcaagagagagattgaccaaa
gaacgacaagaaattatatctcagattcttaagaagaatcctgcgtttaagccaccagct
gactataggccaccaaagcttcagaagaagctttatatacccatgaaagaatacccaggt
tacaattttatcggcttgattattgggcctagagggaatacccaaaagaggatggagaag
gaaacgggtgcaaagattgtaattaggggtaaaggttccgtgaaagaaggtaggctgcag
cagaagagagatttgaagcctgatcctgcagagaacgaggacttgcatgttttggttgag
gccgaaacacaagaatcacttgatgctgctgcagcaatggtggaaaagctcttgcagcct
gtagatgaagtattaaatgagcataagaggcaacagttgagggaactcgctgcattgaat
ggaacaataagagatgaagagtattgtaggttgtgtggtgagcctgggcaccgtcaatat
gcatgtccttctcgcacctcaacctttaagagtgatgttttatgtaagatttgtggtgat
ggtgggcatccaacaatcgattgtccaatgaagggaactacagggaagaaaatggatgat
gaatatcagaatttcttggctgagctaggtggtactgtccctgattcagctaacaagcaa
aactcttcgtcagtcagttctggaagcaatcctccttgggctagcagtactggaggtgct
ggaagtgcacaccctggcttaggttccaatgctgttaagccccccaaagaatatgatgat
actaatttgtacattggatacttgcctcccagtcttgatgatgatggtttgattagtttg
ttttcagcttatggtgatattgtgatggcaaaggtaatcaaggaccgggttactggactg
agtaaagggtatggttttgtgaagtatgctagtgttgacatggcaaacaatgctattaag
ggaatgaatggtagtcttctagagggaagaaccattgctgtgagagttgctggcaagcca
ccacaacctgcagtgcctcctggtccacccacattgtcaatgcccacttaccctgtctct
agtcagccagttggtgcctatccatcacgacaatttacaactggaggtcctattcctaat
gctgcttctgctagttatgcaggaaatccagttccatggggaccaccagttcctcctcct
cccccttatgccccttatgcgcctcctccccctcctcctcctggctcaaccatttatcct
cctgttcatggtcagcctatgccaccttatggtttgcaatatcccccacaaatgcagacg
gttcctcctggtgttccacctccacctcaacctgtgacttctagtgaaacagcacaaagt
tttccaccaggagtgcaatctgaaaatagcacctctgccccagctatgccagctaatatc
tacgggaactcaatgactgcaatgcctccaaattcgcaatctgcatatcctacatcttca
ttaggttactcttcttattacaatgcagttcctccccctccccctcctccgctacctaca
tcttccacagataattctcagagccttagtaatgtcccttgggctccaaatcctcttttg
actccggcagcatcctctggagagaaaacaacctatggtgcagatactgagtatgagaag
ttcatggcagagatgaagtga
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