Gossypium raimondii: 105801246
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Entry
105801246 CDS
T04129
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105801246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105801246
03012 Translation factors [BR:
gra03012
]
105801246
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105801246
Translation factors [BR:
gra03012
]
Eukaryotic type
Release factors
105801246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
105801246
NCBI-ProteinID:
XP_012488023
UniProt:
A0A0D2M161
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Position
7:complement(12113420..12116379)
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AA seq
436 aa
AA seq
DB search
MADGHETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGIDDTLKALEMGAVETLIVWENLEINRYVLKHSATGEIIIKHLNKEQEADQSNFRD
PETSAELEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSFDELSDGEVYEDSD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggtcatgaaactgacaagaacatcgagatttggaaaataaaaaagctaatc
aaggcactagaatctgccaggggaaatgggaccagcatgatatccctcattatgcctcct
cgtgatcaaatatcccgtgtcacaaagatgttaggtgatgaatttggaactgcatcgaac
atcaaaagtagggtcaaccgtcagtctgtgttggctgccattacttctgctcaacagagg
ttgaagctctataataaggttccccccaacgggctggtgctgtacactgggacaattgtt
actgaagatggcaaggaaaagaaggtgacaattgactttgaacctttcaaacctataaat
gcatctttgtacctctgtgataacaagttccatactgaagctctgaatgagcttttagag
tctgatgacaagtttggatttatagtcatggatggtaatggcacgttatttggtacgtta
agtggaaacacaagagaggtacttcataagttcactgtggatctaccaaagaagcatgga
agaggaggacagtcagcccttcgatttgctcgtttgagaatggagaaacggcacaactat
gtgagaaaaactgcagaactggccacccagttctttattaatcctgcaaccagtcagccc
aatgttgctgggctgatactggctggttcagctgacttcaagactgaattgagtcagtca
gacatgtttgatcctcgtttacaagccaagattttgaatgttgttgatgtgtcttatgga
ggtgaaaacggttttaatcaagctattgagttgtctgctgaaatcttgtcgaatgtgaag
tttatacaagaaaagcgattaattggaaaatactttgaggagataagccaggatactgga
aagtatgtgtttggcatagatgatacgttgaaggctctggaaatgggtgctgtagaaacc
cttattgtgtgggaaaatctagagatcaataggtacgtgctaaagcacagtgcaaccgga
gaaattatcataaaacacctgaataaggagcaggaggctgatcagagcaacttccgtgat
cctgaaacctctgcagagttggaagttcaagaaaaaatgcccttactcgaatggtttgcc
aacgagtacaagcgctttggttgttctcttgaattcgtcacaaacaaatcccaagaagga
tcacagttttgcagaggcttcggtggcattggaggtatcctccgctatcagcttgacata
agatcattcgatgagctatccgatggagaagtttacgaggattctgactga
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