Gossypium raimondii: 105801688
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Entry
105801688 CDS
T04129
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gra
Gossypium raimondii
Pathway
gra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105801688
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gra04040
]
105801688
Ion channels [BR:
gra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105801688
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
DUF6525
Motif
Other DBs
NCBI-GeneID:
105801688
NCBI-ProteinID:
XP_012488363
UniProt:
A0A0D2S4B0
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Position
11:63001125..63015427
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AA seq
770 aa
AA seq
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MASYDKDEVPMLSDTYPQSSENNRDSQSQTFISRTRSASISIPLNSMESYQNTHLVGHTG
PLRNERKTPFIQMSGPLYISRKPENSFQLNQSTAAGQKMMEPKAEKFPSFNGKDENDWPD
NNYSGKNEHLLRSGQLGMCSDPYCTTCPTYYNFKPEQQKNSRVSGIFDTKYAFYGDAKGW
ARRLVSFLCSYVPGIMNPHAKVVQQWNKFFVISCLMAVFIDPLFFFLLSVQKENKCIVID
WPATKLFVGLRSVTDFIYMLNMLLQFRLAYVAPESTVVGAGELVDHPKEIAFNYLGGYFS
LDLFVVLPLPQIMISLVLPKHLGSSGANFAKNLLRTAILIQYLPRLYRFLPFLAGQSPLG
FIFESAWANFVINLLTFMLSGHVVGSSWYLLGLQRVNQCLRNACGNSNIRNCKEFIDCGS
GHSPNRNVLPIWTNNSNVSACFTEDGFSYGIYVPTVNLTTEPSIVTRYVYSLFWGFQQIS
TLAGNQTPSYFVWEVLFTMAIVGLGLLLFALLIGNMQNFLQALGRRRLEMSLRRRDVEQW
MSHRRLPVELRRKVREAERYNWAATRGVNEEVLIENLPEDLQREIRRHLFKFVKKVRIFA
LMNDTILDAICKRLRQKIYIKESYVLSRGCLIEKMVFIVRGTMESVEENGIRNPLSEGDV
CGEELLNWCLEHSSVNRDVKKIKLPGQSLHSISSREVRCVTNVEAFSIRAADLQEVTSLF
PRFFRTPRVIRAIRNESPYWKTFAAICIQVAWRYRKKRLNRANTSQSTCC
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcaagttatgataaagatgaggttccaatgctgtcagatacctatcctcagtcatca
gaaaataatcgggattctcaatctcagacatttatctccaggactcggagtgcttcaatt
tctatcccattgaactccatggaatcgtatcaaaatactcatctggtagggcatactggc
cccttgaggaatgaaagaaaaacaccatttatccagatgagcggtccactatatatcagt
cgtaagcctgaaaattcttttcaactaaatcaaagtacagcggcaggccaaaaaatgatg
gaacctaaggctgaaaagtttccttcctttaatggtaaggatgaaaatgattggccagat
aacaactattctggcaaaaatgaacatttactgaggtctgggcaactaggaatgtgcagt
gatccttactgcaccacttgcccaacatattacaatttcaaaccagaacaacagaaaaac
tcaagagtttctggcatctttgataccaagtatgctttctatggggatgccaaaggttgg
gctaggaggttggtctcttttctgtgctcttatgttcctggtattatgaaccctcatgct
aaagttgttcagcaatggaacaaattcttcgtcatttcatgcttgatggcagttttcata
gatccactgtttttcttcttgttgtctgtgcagaaggagaacaagtgcatagtcattgat
tggcctgcgactaaactgtttgtcgggttaagaagtgtgaccgattttatctatatgctt
aacatgctccttcagttcaggttggcttatgtagctcctgagtctacagtagttggtgca
ggagagttagttgaccatccaaaggaaattgctttcaattaccttgggggatacttttct
cttgacttgtttgtggtactcccacttcctcaaatcatgatatcattggtcctaccaaaa
catttgggatcgtcaggagcaaattttgcaaaaaatcttttacggacagccattcttatt
cagtatcttcccagattgtataggtttctacctttcctggctggtcagtctccattggga
tttatatttgagtcagcatgggcaaattttgtcataaaccttctcacttttatgttgtct
ggccatgtcgttgggtcatcgtggtacctccttggattacagagggttaatcaatgtctt
cgaaatgcctgtggtaactcaaatatccgaaattgtaaggagtttatagattgtggctcc
gggcattctcctaatcgcaatgtgctgccaatttggacgaacaattccaatgtctctgcc
tgctttacagaagatggattttcttacggaatatatgtaccaactgtcaatctaacgaca
gaaccaagtattgttactagatatgtatattcattgttttggggattccagcaaatcagt
actctggctggaaatcaaactcccagctattttgtttgggaagttctttttaccatggcc
attgtcggactaggcctcttgctttttgctcttcttatcggaaatatgcagaactttctc
caagcactgggacggaggaggttagaaatgtcactaagacgtcgtgatgtggagcaatgg
atgagtcatcgacgcttgcctgtagagttaagaaggaaagtacgagaggctgaacgatat
aattgggctgccacaagaggggtaaatgaagaagtgcttattgagaacctacctgaagac
cttcagagagagataagacgccatctcttcaagtttgttaagaaagttcgtatatttgct
ctcatgaatgatactattttagatgccatctgcaagagattaagacaaaagatctatatt
aaagaaagctatgttttgtctcgtggttgtctgattgaaaagatggtttttattgtgcgt
gggacaatggaaagtgtagaagaaaatggaataagaaatcccttgtctgaaggggatgtc
tgtggtgaggagcttctcaattggtgtcttgagcattcttcagtaaaccgagatgtgaag
aaaatcaagcttcctggacagagtttgcatagtattagtagccgagaagttagatgtgtg
acaaatgttgaagcattttccattcgggctgcagacctacaagaagttaccagtctgttc
cctaggttcttccgcactcctcgagttataagagccataaggaatgaatcaccatattgg
aaaacctttgctgctatttgtattcaagtagcgtggagatacaggaaaaaacgtctgaat
cgtgccaatacctctcaatccacttgttgttga
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