Gossypium raimondii: 105801761
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Entry
105801761 CDS
T04129
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105801761
03036 Chromosome and associated proteins [BR:
gra03036
]
105801761
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105801761
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
Pre-60S particles
Helicases
105801761
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
105801761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
Motif
Other DBs
NCBI-GeneID:
105801761
NCBI-ProteinID:
XP_012488482
UniProt:
A0A0D2S4V5
LinkDB
All DBs
Position
11:complement(62476776..62481215)
Genome browser
AA seq
697 aa
AA seq
DB search
MPSLAISDLKEKKEEKMMKKKIALETPESDKKTKKIKEPKVREEEDDSAVKKSKKKRKAS
ELQMEEEERSETSSELVEPVDPKEKKKKKKKAKVEEEGDGDGDGDEGKSEDPNAISRFRI
SEALREKLKSKGIEALFPIQAMTFDMILDGTDLVGRARTGQGKTLAFVLPILESLTNGPG
KSSRTSGYGRAPSVLVLLPTRELAKQVFEDFEVYGEAVGLTSCCLYGGAPYHTQEMKLKR
GVDIVVGTPGRVKDHIERGNIHLGSLTFRVLDEADEMLRMGFVDDVELILGKVADASKVQ
TVLFSATLPDWVKGIASRFLKPSKKTVDLVGNEKMKASTNVRHIVLPCSKSARSQLIPDI
IRCYSSGGRTIIFTETKDSASELAGLLPGSRALHGDIQQAQREVTLNGFRSGKFMTLVAT
NVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPKRSSVSKIERE
SGVKFEHISAPQPVDIAKSAGVEAAKIITQVSDSVIPAFKDVAQELLETSGLSAQDLLAK
ALAKAAGYSEIKSRSLLSSMENHVTLLLEAGKPIYTLSFVFGVLKRFLPEEKVQSVQGLT
LTADGMGAVFDVAEDDVEAFLTGAENAANVNLEVLKNALPPLQQRDMSRGRFGGGRGGFG
DRNGGGSRFSGGRGGGRGGFSDRRNGGGRGHYNSKRW
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgccttctttggctatatctgacctcaaagagaagaaagaagagaaaatgatgaagaag
aagatcgctctcgaaacacctgaatccgataaaaaaacgaagaagatcaaggaacctaag
gttagagaagaggaagatgattcggctgtgaagaagagtaaaaagaagcgtaaggcctcg
gagctccaaatggaagaggaggagaggagcgagacgagctcggagcttgttgagccggtg
gatccaaaggagaagaaaaagaagaaaaagaaagctaaggtcgaggaagaaggagatgga
gatggagatggagatgaagggaaaagtgaggatcctaatgcgatttcgaggtttcggatt
tcggaagcgcttagggaaaagcttaagtccaaggggattgaggctttgttccccattcaa
gccatgacttttgatatgattcttgatggcactgatttagttggacgcgcacgaaccggt
cagggtaagacactggcctttgtgttgcctatattggagtctttaacaaatggccctgga
aaatcgtcaaggacgtctggatatggaagggcaccaagtgttctagtacttttaccaacc
agggaattggctaaacaggtttttgaggactttgaagtttatggtgaggcagtggggttg
acatcatgttgtttatatggaggtgctccttaccacacccaagagatgaaactgaagaga
ggggttgacatagttgttgggactcctggacgtgtaaaggatcacatagagaggggcaat
attcacttaggctcattgacattccgagttcttgatgaagcagatgaaatgttgagaatg
ggatttgttgatgatgttgaacttatattaggcaaggtagcggatgcaagtaaagttcag
acagttctttttagtgccaccttgccggactgggtgaagggtattgcttcaaggtttctt
aaaccaagtaagaagactgttgatctagttggtaatgagaagatgaaggctagtaccaat
gttaggcatattgttttgccctgttctaagtctgcaaggtcacagttgatcccagatatt
atacgttgttatagcagtggtggacgaactattatattcactgagacaaaagattctgcc
tctgagcttgctggcttattgcctggatcccgtgctttgcatggtgacatacagcaggcc
caacgtgaggtcacccttaatgggttccgctcaggcaagttcatgacattagtggctacc
aatgtggcagcgcggggattagatatcaatgatgtgcagttaatcatccagtgtgagcct
ccacgtgatgtagaagcatacattcataggtctggacgaacaggcagagcaggcaatact
ggagttgctgtcatgctttatgatcctaaaaggtcaagcgtatcaaagatagaaagagaa
tccggtgtaaaatttgagcacatatctgctcctcagcctgttgatattgcgaaatctgct
ggtgtagaagcagcaaaaataataacccaagtctcagacagtgtaatccctgccttcaag
gacgttgctcaggagcttttggaaacttctggcctatcagcacaagatctgctcgccaaa
gcacttgccaaggctgcaggttactctgagataaagagtagatcccttctatcgtctatg
gagaaccatgttactttacttcttgaagctggaaaacctatttacacactttcatttgtt
tttggtgtcttgaaaagattcttgcccgaggaaaaggttcagtcagtgcaaggtctgacc
cttaccgctgatggaatgggtgcagtttttgatgttgcagaagatgatgtggaagcattt
cttactggtgctgaaaatgcagctaatgttaacttagaggtgttgaagaatgcgttgcca
cccttgcaacagagggacatgtcaagaggaagatttggtggtggacggggtggttttggt
gatagaaatggtggtggtagcaggttctctggcggcagaggtggtggccgaggtgggttt
tccgatagaaggaatggaggtgggcgaggtcattataatagtaagagatggtga
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