Gossypium raimondii: 105801834
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Entry
105801834 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Pathway
gra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105801834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105801834
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105801834
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
105801834
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
105801834
NCBI-ProteinID:
XP_012488597
UniProt:
A0A0D2QJP3
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Position
11:61984156..61986503
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AA seq
336 aa
AA seq
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MESDSIECVSSIDEIVEDHEIPHHNIQHHPHPRHAPHHQLSSSKPHHNGTNNVNSISNIV
GPTAIAPAASVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKIRVHNRCPTCRQELGDIR
CLALEKVAESLELPCKYYKLGCPEIFPYYSKLKHEGICIYRPYNCPYAGSECSVVGDIPF
LVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMA
PVYMAFIRFMGDETEARNYSYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRN
MALFFSGGDRKELKLRVTGRIWKEQQNPDANTCIPN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggatagtatcgagtgcgtgtcatctatagatgaaattgttgaagatcatgag
atccctcaccataatatacagcaccacccacaccctcgtcatgccccccatcatcaattg
tcatcgtcaaagcctcatcacaacggcactaataatgttaatagtattagcaatatcgtg
ggtccaacggcgattgctccggctgctagtgtccatgaattgttagaatgtcctgtttgt
accaattcaatgtatccaccaattcatcagtgccacaatggacatacactttgttctacc
tgtaaaatacgagtacacaaccggtgcccgacttgtcggcaggaactcggtgatattaga
tgtttagcattggagaaagtcgccgagtccctcgagttaccctgcaaatactacaagttg
gggtgcccggaaatattcccctattacagcaaactcaaacacgaggggatttgcatctac
agaccatacaattgtccatatgctggttcggagtgttccgttgttggggatatccctttc
cttgttgcccatttgagggatgatcataaggtcgacatgcacaccggctgcacatttaat
catcgatacgtgaaatccaaccctcgggaagtcgaaaatgctacatggatgttaacagta
ttccattgttttggtcagtatttctgcctacactttgaagccttccagttgggaatggct
ccagtttacatggcatttatccgtttcatgggtgacgagacggaagctaggaactatagc
tacagccttgaagtcggagcaaacggccggaaacttatatgggaaggcaccccacgtagc
atccgtgatagtcaccggaaagtcagggacagccacgatggtctaattatccaacgaaac
atggcacttttcttctccggtggggatagaaaggagctgaaactgagggttactggacga
atatggaaggaacaacaaaatccagatgccaacacgtgcataccaaactaa
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