Gossypium raimondii: 105801850
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Entry
105801850 CDS
T04129
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105801850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105801850
Spliceosome [BR:
gra03041
]
Common components
Common spliceosomal components
SR proteins
105801850
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Transformer
RRM_3
DUF2457
Motif
Other DBs
NCBI-GeneID:
105801850
NCBI-ProteinID:
XP_012488626
UniProt:
A0A0D2T7D8
LinkDB
All DBs
Position
11:complement(61909062..61913003)
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AA seq
257 aa
AA seq
DB search
MSGRFSRTIYVGNLPSDIREWEVEDLFYKYGRILDIELKIPLRPPCFCFVEFEDPRDAED
AIRGRDGYNFDGCRLRVELAHGGRGQSSSDRRGGYGGAAAKFGVSRHSDYRVIVRGLPSS
ASWQDLKDHMRKAGDVCFAEISRDSDGTFGIVDFTNYDDMKYAISKLDDTEFRNPWARAY
IQVRRYESSPSRSRSRSRSRNRSRSLSVKRDRSKSRERPASNSPVKARSVSPVKSYRARS
RSRSRSGSPDKAGSVSH
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgcttctctcgcactatctatgtcggcaacctaccctctgatattagagaa
tgggaggttgaagatctattctacaagtatggtcgtattttggatattgaattgaagatt
ccgctccgccctccatgtttttgttttgttgagtttgaggatccccgggatgctgaagat
gcaatcagaggtcgagatggttataactttgatggttgtcgtttgagggttgagcttgca
catggtggtagaggacaatcctcaagtgatcgtcgaggcgggtatggtggcgctgcggct
aagtttggtgtatcacgtcattctgattatcgagttatcgttcgtgggctcccttcttct
gcttcctggcaagatttgaaggatcacatgcgaaaagctggtgatgtgtgttttgcggaa
atttcacgtgacagtgatgggacctttggtatagttgattttaccaattatgatgacatg
aaatatgctatcagtaaacttgatgatactgagtttagaaatccttgggcaagagcttat
attcaggtgaggagatacgagagcagcccctccaggagtagaagtagaagcagaagcaga
aaccgtagcagaagcctcagcgttaaaagagaccggagtaaatcacgggaaagacctgca
tccaactcaccagttaaagcaagatctgtctctcctgttaagtcatatagagcaagatcg
aggtcaaggtcaaggtcaggatcacctgacaaggctggatcagttagccattga
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