Gossypium raimondii: 105801938
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Entry
105801938 CDS
T04129
Name
(RefSeq) long chain acyl-CoA synthetase 4
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gra
Gossypium raimondii
Pathway
gra00061
Fatty acid biosynthesis
gra00071
Fatty acid degradation
gra01100
Metabolic pathways
gra01212
Fatty acid metabolism
gra04146
Peroxisome
Module
gra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
105801938
00071 Fatty acid degradation
105801938
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105801938
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gra01004
]
105801938
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105801938
Enzymes [BR:
gra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
105801938
Lipid biosynthesis proteins [BR:
gra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
105801938
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of breast milk
105801938
Exosomal proteins of breast cancer cells
105801938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
105801938
NCBI-ProteinID:
XP_012488753
UniProt:
A0A0D2QKF1
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Position
11:61381638..61388367
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AA seq
663 aa
AA seq
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MAEEKNYIIKVEEGKAATDERPSIGPVYRSSFAENGFPAPIPGMESCWDIFRMSVEKYPN
HHMLGHRQIVDGKAGKYVWQTYKQVYDIVMKVGNSIRSCGVEEGGKCGIYGANCPEWIMT
MEACNAHGLSCVPLYDTLGAGAVEFIICHAEVSIAFVEEKKIAELFKTFPNSTKYLRTII
SFGKVTPEQKAEAEKQGLAIFTWEEFLQLGENKQYDLPIKKKTDICTIMYTSGTTGDPKG
VLISNESIITLLAAVDCLLGRVNEELTMNDVYISYLPLAHIFDRVIEELFISHGASIGFW
RGDVKLLLEDIGELKPSVFCAVPRVLDRIYSGLQQKISEGGLLKKTLFNVAYSFKFYNMR
NGSKHAEASPFSDRIVFSQVKERLGGNLRIILSGAAPLSSHVEEFLRVVACCHVMQGYGL
TETCAGTFVSLPHELSMLGTVGPPVPNVDVRLESVPEMGYDALASTPRGEICLKGTTLFS
GYFKREDLTKEVMIDGWFHTGDIGEWQPNGSMKVIDRKKNIFKLSQGEYVAVENLENVYG
CVSDIESIWVYGNSFESYLVAVVNPNKQALERWAADNGVSGDFETICKDPKAKEYILGEL
TRTGKEKQLKGFEFIKAVHLDHVPFDMDRDLLTPTFKKKRPQLLKYYQSVIDDMYKSINK
PNA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaagaattatataataaaggtagaggaagggaaggccgccaccgatgaa
agaccgtcgatcggccccgtttatcgcagtagttttgccgagaatggtttccctgctccg
attcctggaatggaaagttgttgggacattttccgaatgtcagttgagaaatatcctaac
caccatatgctcggtcaccggcagattgtggatgggaaagctggaaaatatgtgtggcaa
acttacaaacaagtttacgacattgtaatgaaagtaggaaattccattcggagttgtggt
gttgaggagggaggaaagtgtggtatatatggtgccaattgcccagagtggataatgacc
atggaggcctgcaatgctcatggactctcttgtgttcctttatatgacactttaggtgct
ggtgctgtggagtttatcatatgccatgcagaagtttcaattgcttttgtagaggaaaag
aagattgctgaactgtttaaaacatttccaaactcaacaaaatacttgagaacaattatt
agctttgggaaggtaacacctgagcagaaggcagaagctgagaagcagggtttggcaata
tttacttgggaagaatttttgcaactgggagaaaataaacaatatgatcttcctataaag
aagaaaactgatatctgcacgataatgtatactagtggaacaactggtgatcccaaggga
gtattgatttcaaatgaaagtatcattactcttttagcagcggtggattgtctgctagga
cgtgtaaatgaagagttgactatgaatgatgtttatatttcttatcttcctcttgcacat
atctttgaccgggtgattgaggagttatttatttctcacggtgcctcaataggattctgg
cgtggggacgtgaaactattacttgaagatattggggagctaaagccaagtgtcttctgc
gctgttcctcgtgtgctggatagaatctattcaggtttacaacaaaagatttctgaggga
ggcttattgaaaaagaccttgtttaatgtggcatattcattcaaattctacaacatgaga
aatggctccaaacatgcagaggcatctccattttctgacagaattgtattcagtcaggta
aaagaaagattgggagggaatttgaggattattctctctggagcagcacctctttcttct
cacgtggaagagttcctacgagtagtggcatgttgtcatgtgatgcaaggatatggtttg
acagagacttgtgctggaacttttgtctcattaccacatgagttgtcaatgcttggtact
gtggggcctccagtaccaaatgtggatgtacgcctagaatctgttcctgaaatgggatat
gatgcccttgcaagcacaccacgaggtgaaatttgtctcaagggaacaacattgttctca
gggtacttcaaacgtgaagacctcaccaaggaggtcatgattgatgggtggtttcacaca
ggggatattggtgagtggcaaccaaatggaagtatgaaagttattgatcgaaagaagaac
atctttaagctttcacaaggtgaatatgttgctgtcgagaacctggagaatgtttatggt
tgtgtttctgatattgaatcgatatgggtttatgggaacagctttgagtcctaccttgtt
gcggttgttaacccaaataagcaagcacttgaacgctgggctgctgacaatggtgtaagt
ggtgactttgaaaccatctgtaaagatccaaaggccaaagagtacatacttggagagctt
acaaggactggcaaagagaaacagcttaaaggttttgaatttataaaagctgtccatctc
gaccatgtaccgtttgacatggaccgcgaccttctcaccccaacatttaagaagaaaagg
cctcaattgctcaagtattatcagagtgtgatcgacgacatgtacaagagcataaacaag
ccaaatgcttga
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