Gossypium raimondii: 105802046
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Entry
105802046 CDS
T04129
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105802046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105802046
03012 Translation factors [BR:
gra03012
]
105802046
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105802046
Translation factors [BR:
gra03012
]
Eukaryotic type
Release factors
105802046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
M157_N_1
Motif
Other DBs
NCBI-GeneID:
105802046
NCBI-ProteinID:
XP_012488909
UniProt:
A0A0D2S6E7
LinkDB
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Position
11:60651024..60653889
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AA seq
437 aa
AA seq
DB search
MVDGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYSKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNAREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDQRLQAKVLNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVEILIVWENLDINRYMLKNSVTGEVIIRHLNKEQEADMTNFQD
SSNSADLEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RSFDEFSDDGEVYDDSE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggtggacggtcatgagactgacaaaaatatcgagatatggaagatcaagaagctgatt
aaagcactcgaagcagctagaggcaatggcaccagcatgatatctctcataatgcctcca
cgtgatcagatatcgagggttaccaagatgcttggagatgaatttgggactgcttcaaac
atcaaaagcagagtcaatcgtcaatctgtgttaggtgcaatcacttctgcccagcaaagg
ctcaaactatatagtaaagttcctcccaatgggcttgtgctctatacgggcacgattgtg
actgaagatgggaaggagaagaaagtcacgattgattttgagcctttcaggcctataaat
gcatctctttatctctgtgacaacaaatttcacactgaggcacttaatgaacttttggaa
tcagatgataagtttggttttattgtgatggatggtaatgggactctctttgggacatta
agtggcaatgctagagaggtgctccataagttcagtgttgatcttcccaagaagcacggg
agaggaggacaatcagctcttcgttttgctcggcttcgaatggaaaaacgacacaactat
gtgagaaagactgctgaacttgcgacacaattttttattaatcctgccactagtcagcct
aatgtttcaggattaatacttgctggatcggctgatttcaaaactgagctgagtcaatca
gatatgtttgatcaacggcttcaggctaaggttctgaatgtggttgatgtctcttatgga
ggtgagaatggtttcaaccaagcaatcgagctttcagcagaaatcctgtcgaatgtgaaa
ttcatacaggagaagcgtttaatagggaaatactttgaggagattagtcaagataccggg
aagtatgttttcggtgtggatgacacactgaaggccttggagatgggagctgttgagata
cttatcgtatgggaaaatctggacataaataggtacatgttgaagaacagcgttaccggt
gaagttatcataagacatttgaacaaggaacaagaagctgatatgaccaacttccaggac
tcatccaactcagctgatttggaggttcaggaaaagatgccacttttagagtggtttgct
aatgaatacaagcgattcggttgtagtctcgagtttgttaccaacaaatcacaagagggt
tcccagttctgccgagggtttggcgggattgggggcatcctccgataccaacttgacatg
agatcgtttgatgagttttctgatgatggagaagtttatgatgattccgaatag
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