Gossypium raimondii: 105802155
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Entry
105802155 CDS
T04129
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105802155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105802155
03009 Ribosome biogenesis [BR:
gra03009
]
105802155
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105802155
Spliceosome [BR:
gra03041
]
Complex A
U1 snRNP components
U1 related factors
105802155
Complex B
105802155
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
Pre-60S particles
Helicases
105802155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
105802155
NCBI-ProteinID:
XP_012489081
UniProt:
A0A0D2QLJ1
LinkDB
All DBs
Position
11:complement(59931637..59936053)
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AA seq
623 aa
AA seq
DB search
MTPYDRRYGDPQSYRQRRSDFMGQPPPVGPPTMGPGMVMPSSYPRGGQIPYGGPPTAHPP
SFHGRVHGPVRGQGDFDSYSSFRPPAGRFEMGRGGDIGHSHADRRSDGIRVREAGRGGGG
RGGGGRGGGGRGYGGRHGGSSRGDLDNVSLPRQNFGKLVPFEKNFYIESPAVREMTEQEV
MFYRRTRDITVQGHNVPKPIRMFRDANFPDYCLEVIANLGFVEPTPIQAQGWPMALKGKD
LIGIAETGSGKTLAYLLPALVHVKAQPPLVHGEGPIVLILAPTRELAVQIQEEAAKFANN
ASIRSTCIYGGAPKGPQTRDLKRGVEIVIATPGRLIDMLEAQNTNLKRVTYLVLDEADRM
LDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVESLARQFLSNPYKVIIGSPDLKANQSI
NQVVEVITDLEKYNRLIKLLKDLMDGNRILIFMETKKGCDQVTRHLRMDGWPALSIHGDK
NQAERDWVLAEFKSGRSPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRA
GAKGTAFTFFTQANAKYARDLIKLLQDAGQVVSPALSTLARSAGSKFGGSGGNFRARGRG
SYGNRAMISGSNAVSLGAKKRPW
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgactccttacgaccgaagatatggcgacccccaatcttaccgtcagcgtagaagtgat
tttatgggccaaccgcctccggtaggtccacctactatgggtccaggaatggtcatgccg
tcctcttacccccgtggcggacaaattccttacggtggccctccaacagcgcaccctccg
tcttttcatggaagagtgcacgggcccgtccgaggtcaaggggatttcgattcgtactcg
agcttccggcctcccgcgggaagattcgagatgggccgcggtggggacataggtcattct
catgcagacaggagaagtgatgggataagagttcgtgaagccggccgtggtggaggcggt
agaggcggtggtggccgtggcggcggcggaagaggttatggagggaggcacggagggtcc
tctagaggggatttagacaatgtttcgcttccaaggcaaaattttggcaagttggttcct
tttgagaagaacttttatatcgaaagtcctgcagttagagaaatgacagagcaagaagta
atgttttatcgtagaacacgggacattacagttcaaggacataatgttccaaaaccgata
aggatgttccgtgatgccaattttcctgattactgtcttgaggtgattgccaatttgggt
tttgttgagccaactccaattcaagctcagggctggcctatggctttaaagggtaaagat
ctcattgggattgctgagactggttctggaaaaacactggcatacttactgccggcattg
gtgcatgttaaagcacagccaccattggtgcatggtgagggtcctattgtattaatatta
gcacctacgagggagttggctgttcaaattcaagaagaagctgcaaagtttgcgaataat
gctagcataaggagtacttgcatctatggcggtgctcctaagggaccacaaactagggat
cttaaaagaggtgttgagattgtaattgccacacctggtcgactgatagatatgctagaa
gctcaaaacacaaacttgaaacgagtgacttaccttgttctggatgaagctgatagaatg
ttggacatggggtttgagcctcaaataagaaagattgtttctcagattcgacctgataga
caaacattgtattggagtgcaacgtggcctaaagaagttgaatctttagcaaggcagttt
ttaagcaacccatataaggttatcattggatcacctgatctgaaagcaaaccaatctatt
aaccaagttgttgaagtcataacagatttagaaaagtacaacaggctaatcaaattgctg
aaggatctgatggatgggaaccgaatactaatattcatggagacaaagaagggatgcgac
caagttactaggcatctcagaatggatggatggcctgccctgtccatccatggtgataaa
aaccaggctgaaagagattgggtcctagctgaatttaaaagtggcagaagtcctataatg
actgccactgatgtggctgcacggggtcttgatgtaaaggacataaagtgtgtgatcaac
tatgattttccttcgagtctggaggattatgtacataggattggtagaactggtcgagca
ggggctaagggaactgcttttaccttcttcacacaggcaaatgcaaagtatgctagggac
cttatcaagctcctgcaagatgctgggcaggttgtctcccccgcattgtctacattggct
cgttctgcaggttcgaagtttggaggttctggaggaaactttcgtgcccgaggacgtggc
agctacggtaaccgggctatgatatcaggatcaaatgctgtatctctcggtgcaaagaag
agaccctggtag
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