Gossypium raimondii: 105802180
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Entry
105802180 CDS
T04129
Name
(RefSeq) vacuolar protein sorting-associated protein 35A isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
gra
Gossypium raimondii
Pathway
gra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105802180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105802180
Membrane trafficking [BR:
gra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
105802180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Urb2
nSTAND3
Motif
Other DBs
NCBI-GeneID:
105802180
NCBI-ProteinID:
XP_012489122
UniProt:
A0A0D2QLP2
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Position
11:complement(59757870..59764911)
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AA seq
790 aa
AA seq
DB search
MIADGVEDEEKWLAAGIAGLQQNAFYMHRALDSNNLRDALKYSAQMLSELRTSRLSPHKY
YELYMRAFDELRKLEMFFKEETRRGCSIVDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQHPVRGLFLRSYLAQVSRDKLPDIGSEYEGDADTVVDAVEFVL
QNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGIDLDMYKETVLP
RVLEQVVNCKDEIAQYYLMDCIIQVFPDEYHLQTLDVLLGAFPQLQPTVDIKTVLSRLME
RLSNYAASSADVLPEFLQVEAFSKLNNAIGKVIEAQPDMPILGVITLYSSLLTFTLHVHP
DRLDYADQVLGACVKKLSGKEKLEDKKATKQIVALLSAPLDKYNDIVTALKLSNYPRVME
YLDSETNKVMATVIIQSIMKNKTRISTADRVEALFELIKGLIKDLDDAFHDEVDEDDFKE
EQNSVARLIQLLHSDDPEEMFKIICTVRKHILGGGPKRLPFTVPPLVFSSLKLVRQLQGQ
EENPFGEEESTTPKKIFQVLNQTVETLSNIPAPELALQLFLQCAEAANDCDLEPVAYEFF
TQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDQDNVKDGERVLLCLKRALRIANAAQQMSNAARGSAGSVTLFVEILN
KYLYFFEKGNPQITVAAIQSLIELITTEMHSDSSTPDPAADAFFASTLRYMEFQKQKGGA
IGEKYEPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagatggagtcgaagatgaagagaaatggctcgccgccggcatcgctggcctc
caacagaacgctttctacatgcatcgcgctttggattcgaacaatctcagagatgctttg
aagtactctgctcagatgttatcagaacttcgaacctcaaggctttcccctcacaaatac
tacgaattatatatgcgagcatttgatgaattgaggaagctggagatgttctttaaggaa
gagacaaggcgtggttgctctattgtcgatctgtatgagctagtacaacatgctggcaat
atattgccaagattgtatctcctctgtactgtaggctctgtttatattaaatccaaggaa
gctcctgctaaggatgttcttaaagatcttgttgaaatgtgccgtggaattcagcatccc
gtacgtgggctctttcttaggagttacctggctcaagttagcagggataaattgcctgac
ataggttccgagtatgaaggggatgcagacactgtcgtggatgctgtggaatttgtgctt
caaaactttacggagatgaacaagttgtgggtgcggatgcagcaccagggacccgcccga
gaaaaggagaaaagagagaaagagaggagcgagctaagagatcttgttgggaagaatctt
catgtgctcagtcaaatagagggtattgaccttgatatgtacaaagagactgttcttccc
cgtgtacttgaacaggttgtcaattgtaaagatgagatagctcaatactatctaatggat
tgcataattcaagtctttcctgatgagtaccacttgcaaactcttgatgtattattgggt
gctttcccacaacttcagccaactgttgacatcaaaaccgtgctatctcgattaatggaa
aggctatcaaattatgctgcttcaagtgcagatgtgttgcctgagttcttgcaagtagaa
gctttctcaaagttgaataatgctattggaaaggtgattgaagcacagcctgatatgcct
atccttggtgtgataactctatattcgtctcttcttacatttactctccatgtccatcct
gacaggcttgattatgccgatcaagttttgggagcatgtgttaaaaaactctctggcaaa
gaaaagctcgaagacaagaaagcaacaaaacagattgttgcactcttaagtgctccactt
gacaaatacaatgacattgttacagcattgaagctttcaaattatcctcgtgttatggaa
taccttgacagtgaaacaaataaagtcatggcaactgtgataattcaaagcattatgaag
aacaaaactcgtatctctactgcagacagggttgaggcgttgtttgaactgataaaaggt
cttattaaggatctggatgatgcgtttcatgatgaggttgatgaagatgatttcaaggag
gagcagaattctgtagcacgtcttattcagttgttgcacagtgatgaccctgaagagatg
tttaagataatatgcacggtgaggaagcatatcttgggtggaggaccaaaacgcctaccc
ttcactgtccctccccttgttttctcttcacttaagttggttcggcaactacaaggccaa
gaggaaaatccttttggagaagaggaatcaactacacccaagaaaatattccaggttttg
aatcagactgttgaaactctctctaacattccggcccctgagttggcactacagttgttt
ctgcagtgtgctgaggctgcaaatgactgtgatttagaacctgtggcatatgaatttttc
acacaagcttacattttatacgaggaagagatttcagactcaagggcacaggttactgct
atacatttaataattggaactctgcagaggatgcatgtctttggtgttgaaaatagggat
actttaacacacaaggctacagggtattctgcgaaacttttgaagaagcctgatcagtgc
agagctgtttatgcatgctcgcatctcttctgggttgatgatcaagacaatgtaaaagat
ggagagagggtcttgctttgccttaagcgggcactgagaattgcaaatgctgctcaacaa
atgtcaaatgcagcacgaggtagcgctggatcagtcactctctttgttgagatactgaac
aagtacctttatttctttgagaaggggaacccccagatcactgttgctgcaatccagagt
ctgattgaattaataacaaccgagatgcatagtgactctagcacaccagatccagcagcg
gacgctttctttgccagcactctcagatatatggagtttcagaaacagaaaggtggagct
ataggtgaaaaatatgaacctatcaaggtgtga
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