Gossypium raimondii: 105802197
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Entry
105802197 CDS
T04129
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gra
Gossypium raimondii
Pathway
gra00900
Terpenoid backbone biosynthesis
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Module
gra_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
105802197
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gra01006
]
105802197
Enzymes [BR:
gra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
105802197
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
105802197
2.5.1.29 geranylgeranyl diphosphate synthase
105802197
Prenyltransferases [BR:
gra01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
105802197
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
105802197
NCBI-ProteinID:
XP_012489147
UniProt:
A0A0D2P390
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Position
11:complement(59575605..59577314)
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AA seq
372 aa
AA seq
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MASVNLCSWVQSYSIFNQASRSKYSLLPRSLPFNPLMNLSSSTSKTRGFASIPSICSVIT
KGDAVKEEEEQQQPQNPSFDFKTYMVQKATMINQALDSAVSLREPVKIHEAMRYSLLAGG
KRVRPVLCLAACELVGGQESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKV
FGEDIAVLAGDALLAFAFEHVAVSTVGVTPGRIVRAIGELAKSIGAEGLVAGQVVDINSE
GLTDVGLDHLEFIHVHKTAALLEAAVVLGAILGGGCDEDVERLRKFARYIGLLFQVVDDI
LDVTKSSKELGKTAGKDLLADKVTYPKLIGIEKSKEFAEKLRSDSLELLQGFDSEKAAPL
IALANYIAYRQN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggtgaatctgtgttcttgggttcaatcttactccattttcaaccaagcttct
agatccaaatattctcttttgcccagatcccttccattcaaccccctcatgaatctgtca
tcttcaacctccaaaacacgcggctttgcatctattccttcaatttgctcggtcattacc
aaaggagacgcggtcaaggaagaagaagaacaacagcagcctcaaaacccaagctttgat
ttcaaaacttacatggttcaaaaggccactatgattaaccaagccctggactctgctgtt
tcactccgtgaacctgttaaaatccatgaagcaatgcgttactctcttttggcaggtggc
aaaagggtccgaccggtgctttgtttagctgcttgtgagcttgttggtggccaagaatcc
atggctatgccagcagcttgtgctgttgaaatgattcatactatgtctttaatccacgat
gatcttccttgcatggacaacgatgatcttcggagagggaaaccaactaatcacaaagtt
tttggtgaggatatcgctgtcttagctggggatgctcttttagcttttgcttttgaacat
gtagctgtttctacagttggtgttacgcctggtaggattgtaagggcaattggagaatta
gctaaatctattggggctgaagggttggtggctggtcaagttgtggatataaatagtgag
ggactaacagatgtggggttggatcatttagaattcattcatgttcataaaactgctgct
ttgcttgaagctgctgtagttttgggggcaattcttggaggtggatgtgatgaagatgtg
gaaaggttgaggaaatttgcaaggtatattgggcttttgtttcaggttgtggatgacatt
ctcgatgtgacaaaatcatctaaggaattagggaagactgcaggaaaagatttgttggct
gataaagtcacttatccaaagttgattggaatagagaagtcaaaggagtttgcagagaaa
ttgagaagtgattcattagagttgctccaaggatttgattctgagaaagctgcccctttg
attgctttggctaattacatagcttacaggcaaaactaa
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