Gossypium raimondii: 105802235
Help
Entry
105802235 CDS
T04129
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
gra
Gossypium raimondii
Pathway
gra04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105802235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
AIG2_2
Motif
Other DBs
NCBI-GeneID:
105802235
NCBI-ProteinID:
XP_012489204
UniProt:
A0A0D2SEN1
LinkDB
All DBs
Position
11:complement(59252801..59255225)
Genome browser
AA seq
592 aa
AA seq
DB search
MFMAVESTLPTPVRTPASDKDAKVLQFIEEMTKNVDSVQERVLREILGRNAETEYLERFS
LNGATDRETFKSRIPVVTYEDIQPEIQRIANGDKSPIFSVHPISEFLTSSGTSAGERKLM
PTIHEELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKAETKTPGGLLARPVLTSYYN
SDHFKTRPYDPFNVYTSPNEAILCVDSFQSMYAQMLCGLIMRDEVLRVGAVFASGLLRAI
HFLQNNWKQLAHDIATGTLNPKITDAPVRECMRKILKPNPELAQLVTMECYEENWECIIK
RIWPRTKYLDVIVTGAMAQYIPTLEYYSGGLPMACTMYASSECYFGLNLNPMCKPSEVTY
TIMPNMAYFEFLPHGSSTSCLVDLADVEVGKEYELILTTYAGLCRYRVGDILRVTGFHNA
APQFRFIRRKNVLLSIESDKTDEAELQNAIENASLLLKEFNTSVVEYTSYADTKQIPGHY
VIYWELLVKDSAIAPTDDVLNRCCLQMEESLNSVYRQSRVADNSIGPLEIRVVENGTFEE
LMDYAISRGASINQYKVPRCVSFTPIMELLNSRVVSKHFSPDLPHWTPERRR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgttcatggctgttgaatcaactctcccgactccagtccgaactcccgcttccgataaa
gatgcgaaagttcttcaattcattgaagagatgacaaaaaatgtcgattcagttcaagaa
agggttttacgtgagatcctaggccgaaatgccgagactgagtatctcgaacggttcagc
ctcaatggagctacggaccgggaaacattcaagtctcgaatccctgttgtcacttatgaa
gatatacagcctgagattcaacgtatcgccaatggtgataagtcccctatcttttcagtt
catcccatttcagagtttctcactagttctgggacttcagctggagaaaggaagctgatg
ccaacaattcatgaagagttggatcgtcgtcaactcttgtatagccttcttatgcctgta
atgaacctctacgttccaggattggacaaagggaagggtctttatttcttgtttgtgaaa
gctgaaacaaagactcctggagggcttttggcacgcccagtcctcacaagctactacaac
agcgaccactttaagactcgcccatatgaccctttcaatgtttacactagccccaacgaa
gccatcctttgcgttgactcttttcaaagcatgtacgcccagatgctttgtggcttgatc
atgagggacgaggtccttcgtgttggtgccgtttttgcctctggcctgcttagggccatt
catttccttcaaaacaactggaaacaactggctcatgacattgcaacgggaaccttaaac
cctaaaataaccgatgctccggttcgagaatgcatgagaaaaatcttgaaacctaaccca
gaacttgcccagttggttaccatggaatgttatgaggagaattgggaatgtatcatcaaa
agaatttggcccagaactaagtaccttgatgttatcgtaactggagccatggctcaatat
atccccacccttgaatattacagtggtggcttgccaatggcttgcacgatgtatgcttcg
tcagagtgttatttcggtctcaatctcaacccgatgtgcaaaccatccgaagtcacatac
actatcatgccaaacatggcctactttgagttcttgcctcatggatcatccacttcgtgc
ctagttgatctcgccgatgtcgaagtcggcaaagaatatgagctcatcctcaccacctat
gcaggattgtgccgctacagagtcggcgatatccttcgagtcaccggttttcacaacgcg
gccccacagtttcgtttcattaggagaaagaacgttttgttgagcatcgagtcagataaa
acggatgaggctgagttacaaaacgccatcgaaaacgcttctcttttgctgaaggaattc
aacaccagcgttgttgagtacacaagctacgccgacaccaaacaaataccgggtcactac
gttatttactgggaattactcgtcaaagactcagctattgcaccaaccgatgatgttttg
aaccgatgctgcttacaaatggaggaatccttgaactcagtttaccgtcaaagccgagtt
gctgacaactcaatcggcccactcgagataagagtagtggaaaacggcacgtttgaggag
ttaatggattatgcaatttcaaggggtgcctccataaatcaatacaaagttccaagatgt
gtaagcttcactccaatcatggaacttctgaactcaagggtggtttctaaacatttcagt
ccagatttaccacactggaccccagaacgtcgccgttga
DBGET
integrated database retrieval system
