Gossypium raimondii: 105802337
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Entry
105802337 CDS
T04129
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
gra
Gossypium raimondii
Pathway
gra03440
Homologous recombination
gra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105802337
03460 Fanconi anemia pathway
105802337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gra03032
]
105802337
03400 DNA repair and recombination proteins [BR:
gra03400
]
105802337
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
105802337
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Topoisomerases
105802337
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
105802337
FA (Fanconi anemia) pathway
105802337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
zf-CCHC
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
105802337
NCBI-ProteinID:
XP_012489369
UniProt:
A0A0D2P435
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Position
11:complement(58495742..58513168)
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AA seq
928 aa
AA seq
DB search
MSGTIKVLNVAEKPSVAKSVSGFLSRNQALRVRDGRSRYNRIFEFNYSIRGQPCHMLFTS
VTGHLMELEFEDRFRKWHSCDPLDLYHAPVRKFVPEDKLDIKRTLEEEARRCQWLVLWLD
CDREGENIAFEVINVCRAVNRHLTIRRARFSALIDREIHHAMQNLIDPNPWFSDAVDARQ
EIDLRIGASFTRFQTMLLRDKFVIDSATDDRNLVLSYGPCQFPTLGFVVERYWEVQSHEP
EEFWTINCSHRSDEGVATFNWMRGHLFDYTCAVIVYEMCVQEPTATVTKVQHKEKLKYPP
YPLNTIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDCFSSRTDLHAIVQEQQ
GHPDWGSYAQRLLDPETGLWRNPGSGGHDDKAHPPIHPTKFSTGEHGWSQDHRTLYELVV
RHFLACVSQPAVGAETTVEIDIAGELFSASGRVILERNYLDVYRYESWGGSMIPTYTVGQ
QFVPASLTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTR
FSPTNLGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKSKDEVLATCLQQMKACFF
DARLNKVKLLEAMAVFFERSNRAVGGDNYAAGEVVRQCDLCQESSMVLKKNRDGNFMVGC
SGFPQCRNAIWLPGSILEAAVTSNICSSCNPGPVYLIQFKFRQIEIPPGFNANHLVLLSH
YFPRCPILMKFSSYGCIGGCDDTLRQLIEICGTGSRMSARGRGPTTTSSNGQRSSNRHNS
CIHCQQTGHSSNDCPSQFSRSRNSQSHTNSENGDPSVSCSTCGMPCVLRTANTANNRGRK
FYSCPSQECNFFIWEDGVSNGNGGRSIPSTNCSASNSGRRGGRGQSGRNRSHAADTTFVS
ATGDPVSNRCYVCGDPSHFANVCPNRGM
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcacaatcaaggttctgaacgtggcggagaagccgtcggtggcgaagtcagtg
tcgggattcctctcaaggaaccaagccctacgtgtgcgcgatggccgctcccggtataac
aggatatttgagtttaattactcgattcgtggccaaccctgtcatatgctcttcacctct
gtcactggccacttaatggagctcgaattcgaggaccgcttccgcaagtggcactcctgt
gacccactcgatctctaccacgccccggttcgcaaattcgttcctgaggataagctggat
attaagaggacgttggaggaggaagctaggaggtgtcaatggttggttctctggcttgat
tgtgacagagaaggtgaaaacattgcatttgaggttatcaacgtttgcagagctgtgaat
cgtcatcttacaatacgaagggctcgattctccgcattgattgacagggaaatccatcat
gctatgcagaatcttattgatccaaatccatggttttctgatgctgtagatgctaggcag
gaaatagacctgcgaattggtgcttccttcaccagatttcagactatgctgttgagagat
aaatttgttatcgattctgctacagatgacagaaatcttgttctaagttatggtccttgt
cagttcccgacgctcggctttgttgtggaacggtattgggaagtacagtcacatgagcct
gaagaattttggacaatcaactgttctcacagatcagatgaaggtgttgccaccttcaat
tggatgcgtggtcatctttttgattacacctgtgcagttatagtttatgaaatgtgtgtt
caagagccaactgctactgtcacaaaagttcaacacaaggaaaagcttaagtatcctcca
tatcctttgaataccattgagcttgaaaagcgtgcttcacggtatttccgtatgagttct
gaacacactatgaaggtggcagaggaactataccaagctggttttatcagttatcctcgt
acagagactgattgcttttcaagcaggactgatttgcatgcaattgtgcaagaacaacag
gggcatcctgattggggttcttatgcacagagattattagaccctgagacaggactctgg
agaaaccctggcagtggtggacatgatgacaaggctcatccacccattcacccaacaaaa
ttttctactggggaacatggttggagtcaagaccaccgtacattatacgaactggttgtc
cgccatttcttggcttgtgtttcacaaccagctgtaggggctgaaaccacagttgaaatt
gatattgcgggtgaattattttctgcctcaggaagagtaatattagagagaaactactta
gatgtttaccggtatgaatcatggggaggttcaatgattccaacctacactgttggacag
cagtttgtcccggcatcactgactttagacacaggagtcactagaccaccaccccttttg
agtgaagctgatttactaagttgtatggacaaggcgggaattggtactgatgcaacaatg
catgatcacattaaaaagctgctagatcgattttatgcaacaaaggactcaaatactcgt
ttctcgcccaccaatcttggtgaagcactggttatgggatatgatgacatggggtatgaa
ctctggaaaccaaatctcaggtcgatgatggagtttgacatgaaagaagttagtgtaggc
aataagagtaaagatgaagttttggcaacttgcttgcagcagatgaaagcttgcttcttt
gatgctaggttgaacaaagtgaaactattagaagctatggcggttttctttgagagatca
aatcgagctgttgggggtgacaactatgcagctggagaggtggttaggcagtgtgatctt
tgccaagaatcttctatggtgctgaagaaaaaccgtgatggcaatttcatggttggatgc
tcaggttttccacagtgtaggaatgctatttggctccctggatcgatactggaagctgca
gtaaccagtaatatttgcagctcctgcaatccaggtcccgtttatttgattcaatttaag
tttcgccaaattgaaataccacccggcttcaatgctaatcatctcgtgctattgtcccat
tattttccccgttgtcctattctaatgaaattttcttcttatggttgcattggcggttgt
gacgatactcttagacaactgattgagatatgtggaacaggttctcgcatgtcagcacga
ggtagaggacccactacaacatccagcaatggccagagaagtagcaacagacacaatagt
tgcatacactgtcagcaaacaggccattcttcaaatgattgcccttcacagttttcacgt
tctcgaaattctcagtctcatactaactcagaaaatggggacccttcagtgtcctgtagc
acatgtggaatgccatgtgttttacgaactgctaatacagcaaataacaggggaagaaag
ttctactcatgtccatcacaagaatgcaacttctttatatgggaggatggcgtcagtaat
ggtaatggtggaagaagcattccttccaccaattgctcagcatccaattctggcaggaga
ggtggccgtggtcaatctggtcgcaatagatcacatgctgctgacacgacttttgtgtca
gcaaccggggatcctgtatccaacaggtgttatgtttgtggtgatccatcacactttgct
aatgtctgccctaatcgtggcatgtaa
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