Gossypium raimondii: 105802345
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Entry
105802345 CDS
T04129
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
gra
Gossypium raimondii
Pathway
gra04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
105802345
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gra01009
]
105802345
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105802345
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gra04040
]
105802345
Protein phosphatases and associated proteins [BR:
gra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105802345
Membrane trafficking [BR:
gra04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
105802345
Ion channels [BR:
gra04040
]
Chloride channels
Chloride channel (CLC)
105802345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
105802345
NCBI-ProteinID:
XP_012489384
UniProt:
A0A0D2S8B3
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All DBs
Position
11:complement(58419254..58425212)
Genome browser
AA seq
767 aa
AA seq
DB search
MDQENKVANEEGDIECYYGKDMEDRIYSQPLLTKRYNTTSQIAIVGANACPVESLDYEII
ENELFKQDWRSRRTIQIFQYVLLKWAFALIIGLGTGLVGIFNNIAVENISGFKLLMTTKL
MLEHKYYKAFAALASCNLALAAAAAALCAYIAPAAAGSGIPEVKAYLNGVDAHSILAPST
LFVKIFGSILCVSAGFVVGKEGPMVHTGACIASLIGQGGSRKYHLTWRWLRYFKNDRDRR
DLITCGAAAGVASAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAIVLRAFIQLCS
TGTCGLFGEGGLIMYDVSAAKVAYSVPDILAVILLGVIGGIFGSLYNYLVDKVLRTYSII
NEKGPAVKILLVVTISLLTSICSYGLPWFATCIPCPIDTTESCPNTDLSGNYKSFQCPPN
HYNDLASLFLNTNDDAIRNLLSTSTTKEFHISSLFIFFIAIYCLGVITYGIAIPSGLFIP
VILAGAGYGRLIGRLFDPITKLDVGLFALLGAASFLGGTMRMTVSLCVILLELTNDLLLL
PLVMLVLLISKTVGDMFNHGVYDQIVKLKGLPYMEAHAEPYMKHLVARDVVSGPLITFSG
VEKVGNILHALKTTGHNGFPVIDEPPFADAPELCGLVLRSHLLVLLKGKIFSRDRVLSGD
EVVHRISKFDFAKAGSGKGVKLEDLDIKDEEMDMYVDLHPITNTSPYTVVETMSLAKAAV
LFRQLGLRHMCVVPKSQGRPPIVGILTRHDFLPEHILGLYPHIRLRK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagaaaataaagtagcgaatgaggaaggtgatattgaatgctactacgggaag
gacatggaggataggatctatagtcaacccctgttgactaagagatacaacaccacctcc
cagatcgctattgtgggtgccaatgcttgtcccgttgagagccttgattatgagattata
gaaaatgaattattcaagcaggattggagatcaaggaggacgatccaaatatttcagtat
gttctgcttaaatgggcatttgcactgattataggcctcggcactggacttgttgggatc
tttaacaatatagcagttgagaatatttctgggttcaagctgctaatgaccacgaaactc
atgctcgagcacaaatactacaaggcttttgcagctttagctagttgcaatttagctctg
gcagcagcagctgcagctctttgtgcttatattgctccagcagcagcaggttctggtatt
cctgaagtgaaagcctatctcaatggcgtggatgctcattcgatactggctccaagtact
ctctttgtaaagatttttggttcgattctttgtgtatctgctggatttgttgttggcaaa
gaagggcctatggttcatacaggtgcttgcatagcttctttaattggacaaggaggttcg
cgaaaataccatttgacttggagatggcttagatatttcaaaaatgatcgtgataggcgg
gacctgataacttgtggagctgctgctggtgtggcttccgcctttcgtgctccagttggc
ggtgtactctttgcccttgaagaggcagcatcatggtggaggagtgcacttctttggaga
acctttttcacaacagcagtagttgctatagttttgagagctttcatacagttatgctct
actggaacttgtggtttgtttggggaaggaggactaattatgtatgatgtcagtgcggcc
aaagtggcatatagcgtgccagatattcttgctgtgatacttctaggagttattggaggc
atttttggaagcttatataactatcttgtggataaggtccttcgcacttacagcatcatt
aatgaaaaaggacctgctgttaagatcctacttgttgtcaccatctccctgttaacatca
atctgttcctatggattgccatggtttgctacatgcatcccttgccccattgacacgact
gaaagctgccccaacactgatctatctggaaactataaaagctttcaatgtccaccaaat
cattacaatgatctggcctccctctttctaaatactaatgatgatgctatccgtaaccta
ttgagtaccagtactacgaaagaatttcatatctcctcccttttcattttcttcattgct
atttactgccttggtgttatcacttatgggatagctataccctctgggctcttcattcct
gtcatattggctggagctggctatggccgccttattggtagactatttgatccgatcact
aaactcgatgttggtctgtttgccctccttggggcagcttcttttcttggtggcactatg
agaatgacagtttccttgtgtgttatactgcttgagctcactaatgatctgttgctgctt
ccacttgtcatgctggttctccttatctcgaaaactgtgggtgatatgttcaaccatggg
gtctatgaccaaatagtaaaactaaaaggattgccatacatggaggctcatgcagaaccg
tacatgaaacatttagttgctcgagatgttgtttctggtcctttaatcaccttttctggt
gttgagaaggtcggaaacatattacatgctttgaaaactacagggcataatgggttccct
gttattgatgaaccaccttttgcagatgctccggagttgtgtgggcttgttctaaggtct
catttacttgttttacttaaaggaaagatattttcaagggatagggtactttcaggagat
gaggtagtacatagaatctccaaatttgacttcgccaaggcagggtcaggaaagggagtc
aaactagaggatcttgatatcaaagacgaggaaatggacatgtatgttgatctccatcca
atcaccaatacatcaccgtacacagtggttgagaccatgtcacttgccaaagctgcagtt
ctcttccgtcagctaggtctccggcacatgtgtgtggtaccaaagagtcaggggaggcct
ccaattgttggaattctgacccggcacgacttcctgccggagcatatattgggactgtac
cctcacatcaggcttcggaaatga
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