Gossypium raimondii: 105802389
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Entry
105802389 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105802389
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105802389
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105802389
Surveillance factors
Other surveillance factors
105802389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
105802389
NCBI-ProteinID:
XP_052480187
LinkDB
All DBs
Position
11:58154260..58161213
Genome browser
AA seq
1630 aa
AA seq
DB search
MADGKLDLPDDLMPSKICSDHFPKDEAWDRNLEEKGLTGLLDDNKDQQTSESSIPLSPQW
LYSKVAEAKTLTVGASGDTKTPNLLPHGTPGDPNLKDSWRLDSSQDKKEWRRTAPDLESS
RHWREEERETSLLGRRDRRKEDRRTDISSTMDVPENRTLLSSERRQDVCNRSSGHESRRD
NKWSSRWGLEDKEKDSRNEKRTDAKKEDAPSDKQALASGGRPASERENDSRDKWRPRHRL
EFHAGGSASYRSAPGFGLERGRVERSNVGFAAGRGRPNSNASLQIGRPQSAPVVGALPVD
KNMTLNAGSYPRGKLLDIYRKQKTAPNFDNLPDEMDHLSTVTQKEIVVPLAFVPPDAEEK
AILRDIWKGKTISSEVVYNSFMDASEGKECFSVNRKDSAEPGEKAAVNNNFEGNHAETFY
VSDSQMIMSKEMNSSIEGGQRCMPPSDVDVTNALGSDREMGGSTNYMDELKSFDNRQVAD
LKMQKDSNVKDNGSSMKFGVGELPEESSSLFGFSSLQPRVGCNLISVEGNIAAHSLESAI
PPEDMSLCYLDPQGVIQGPYLGIDIISWFEQGYFGTDLPVRLANAPDGSPFQELGEVMPH
LRMNPGSASSVSAVARMRVPDRFEGSLEETISSSASASAPAQGSAIGREQQQSFSPFEPF
GTNFQLRGPCESGHSEHQFYEDPNIHNFAVAQADEIIFPGRPGSAGADPLKVSTEMQDPL
RHPASHLSIANEFSKTNAPHRGDELLPEAWSDDHRRNAVFNPNIHLGTTGARPLSHRDQE
HNGLDLVQHLMSQKLPNEPLQEKNNFFHALPHSTGFGVEHIHSFDLMQSKNLNHQQSVHH
SAPHMEHLLELQVEQQRQLELQRQQHQLELQKQQQLEHQRQQQLEHQRQQQLEHQRQQQL
EHQRQQQLELQQHQRLLELQRQQQLELQQHQRQLELQRQQELRHHQIELLQQLQQQHRQQ
QNSQSQQILLDQLLQRQISDPGYGQDVFEAARDIQLDQVQLQRHLRSELQNNSQASRHLD
PSLEQIIQAKVNQGAVQGQQADFLDFMSQAKYGNMLPSEHQLRLQREQFQVQQLSRALSQ
QLGTEEDRQLAGSLSVDEVGQFVRNPGIHPQAQSMELNGSDLHQKRLSSFEEQISNIKRN
HALREQQQRGTFDPSPTAFARSAHSAATPGMKLDNVNSLDIAEHLYMHSNNQLGPFSSGN
HSFSQQTLGDVYASRPDLVYHFGKNEQLENSWAGKQMQQLNLEADLQRRESEVVSSTWAS
AGGIHEKSKKALMDLLHQKLGIQSRRSSEGDYQYSTSSSRGRESFWPVSEPQASSFPFPH
FSNQEVHINNSYLEGPQNSNSGALLQDHLFGVAANGGVNQVVNCERLPHKSNMGSFAEDQ
SLLLGAEDLSSSSYADASLVSKSAVDKEVGELEGKEKKNGSKGMISRTGSVSGFEDNILE
QVEMPLDCADLQSITHIRHCSLSTGGNGRLYGNGIGLEKSVEDRPNDRLLSGVLNGVDKV
AQISSSHDMFSDQNAVPFVKQKSLTSQAKRTVETEASGKKDVSMRRTSSYNEAVVSEASF
MEILKKPALHGAEVPVYGSAFEPPSSDVASQAGRSGKKKGKKGRQIDPALLGFKVTSNRI
LMGEIQRLDD
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggaaaactcgatctacctgatgatctcatgccctcaaaaatctgctctgac
cacttccctaaagatgaagcttgggataggaacttggaggagaaaggactgacggggcta
cttgatgacaacaaagatcaacaaacttcggagagcagcatacctctgtccccacagtgg
ctttactctaaagtagccgaagcaaagacattaactgttggagcatctggggatacaaaa
actccgaatttgttgcctcatggaacccctggcgacccgaatctgaaagatagttggcgt
ttagatagttctcaggacaagaaagaatggaggaggactgcacctgatcttgaaagcagc
cgacactggcgtgaagaggagagggaaacaagcttacttggtcgaagagatcgcagaaaa
gaagatcgtcgcactgatatttcttcaacaatggatgttcctgaaaataggactttgttg
tcttcagaacgacgtcaagatgtttgtaaccgtagttcagggcatgaatctcgaagggac
aacaagtggtcttcgagatggggtcttgaagacaaagaaaaggattcacgaaatgagaag
aggactgatgctaagaaggaagatgccccttctgacaaacaagcacttgccagtgggggg
cgcccagcttctgagcgcgagaatgattctcgtgataaatggaggccacgtcatcggttg
gaatttcatgcaggtgggtctgcttcttaccgcagtgctccaggatttggtttggagagg
ggacgagtggagagatcaaatgtgggttttgcagcaggacgaggaaggccaaattccaat
gcaagcctacaaattgggaggccacaatctgctcctgttgttggagctcttcctgtggat
aaaaacatgacccttaatgcgggttcctatccaagaggaaaactccttgacatttaccgc
aaacaaaagactgctccaaattttgacaacctacctgatgagatggatcatttatccaca
gtaacacaaaaagaaattgttgtgcctttggcatttgttcctcctgatgcagaggaaaag
gctatcctcagagatatatggaaagggaaaactatcagcagtgaagtggtctacaactca
tttatggatgcaagtgaaggaaaagagtgtttctcagttaacaggaaggatagtgctgaa
cctggtgagaaggctgctgtaaacaataattttgaggggaatcatgctgagacattttat
gtgtcagattcacagatgattatgagcaaggaaatgaatagttcaatagaaggtggacag
agatgcatgccaccatctgatgtagatgtaaccaatgctttggggtcagatagggagatg
ggtggttccacaaattacatggatgaattaaaatcttttgataatcggcaagtagctgat
ttgaaaatgcaaaaggactctaatgtgaaggacaatggatcatccatgaaatttggagtg
ggcgagcttccggaagagtcaagttctctgtttggtttttcgtcactacagcctagagtc
ggctgtaacctgataagcgttgagggcaatattgctgcacattcactggaaagtgctatc
cctcctgaggatatgagcctgtgttatcttgatcctcaaggggtaattcagggaccgtat
ttggggattgacataatttcatggtttgagcaaggttattttggtacagatttacctgtt
cgattggcaaatgctcctgatgggtcgcctttccaagaacttggtgaagtcatgcctcac
ctaagaatgaatcctggttcagcctccagtgttagtgcagttgccagaatgcgagtacct
gatcgttttgaagggagcttggaagagaccatatcttcttctgcttctgcttctgctcct
gctcagggatctgccattgggcgtgagcagcagcaatctttttctccttttgagccattt
ggtactaactttcagttaagagggccttgtgaaagtggtcattctgagcaccaattttat
gaagatccaaacatccataattttgctgttgctcaagctgatgaaatcatttttccagga
aggcctggaagtgctggtgctgaccctttgaaagtttctactgagatgcaagatcctttg
cgtcaccctgccagtcatttatccattgcaaatgaattttcaaaaaccaatgcacctcat
cgaggtgatgagttgctcccagaggcttggtctgatgatcatagaagaaatgccgtgttt
aatcctaacattcatctaggcactactggtgctaggccattatctcacagggaccaagaa
cacaatggtttggacctggtacagcacttaatgtcacaaaagttgcccaatgaacctctt
caagagaaaaataatttctttcatgcccttccacattcgaccggatttggtgtggagcac
atccatagttttgatctgatgcagagcaagaatctcaatcatcagcagtcagtccatcat
tcagctccccatatggaacatcttttggaacttcaagttgaacagcagcggcagttagaa
ctacaacggcagcagcatcagttggagcttcagaagcagcagcagttggagcatcagcgg
cagcagcagttggagcatcagcggcagcagcagttggagcatcagcggcagcagcaattg
gagcatcagcggcagcagcaattggagcttcagcagcatcaacgtctgttggagcttcag
cggcagcagcagttggaacttcagcagcatcaacggcagttggaacttcagcggcagcag
gagcttcgtcaccaccaaattgaactgttgcagcagttgcaacaacaacatcgacagcag
cagaattctcaatctcaacagattcttcttgatcaattgctgcagcgtcagatttctgat
cctggctatggtcaggacgtatttgaagctgctagagacatccaacttgatcaggttcag
ttacaaaggcatcttcgtagtgaattgcagaataattctcaagcatcaaggcacctggat
ccatcactggagcagatcatccaagcaaaggttaaccagggtgcagtccaagggcaacag
gctgattttttggatttcatgtcgcaagcaaagtatggcaacatgcttccttcggagcat
cagctccgtcttcaacgagagcagtttcaagtgcagcagttatctagggcgctgagccaa
caattaggaacggaggaggatagacaacttgctggttctttgtctgtagatgaagttggt
cagtttgttaggaatcctggcattcatccccaggctcaatcaatggagttgaatggttca
gatcttcaccagaagaggctttcatcttttgaagagcaaatcagcaatattaaaaggaat
catgctttgcgggagcaacagcagcgagggacttttgaccccagccctacagcatttgcc
aggtctgctcattctgctgctactcctgggatgaaattagacaatgtaaattctctagat
attgctgaacatctctatatgcactctaacaaccaactgggtccattttcttctggtaat
cactcttttagccaacaaactttgggtgatgtgtacgcatctcgtccagatttagtctac
cactttgggaaaaatgagcagctagaaaatagttgggctggaaaacagatgcaacaatta
aatcttgaagcagatttgcaaagaagggagtccgaagttgtttcaagcacttgggcatca
gctggagggattcatgaaaagtctaagaaagctttaatggaccttcttcaccaaaaactt
ggtattcaatcgagaaggtcatcagaaggagattatcagtattctacttcatcttccaga
ggcagggaaagcttttggcctgtttctgagccacaagcttccagttttccttttcctcat
ttctcgaatcaagaagttcacataaacaactcatatctggaaggccctcaaaattccaat
tcaggtgccttattgcaagatcatttgtttggagttgctgctaatggtggtgttaaccag
gtggttaactgtgaacgattgcctcataaatccaatatgggttcatttgctgaagatcag
tcattgttgttgggcgctgaagacctgtcttctagtagttatgcagatgctagcttagtg
tcaaaatctgctgtggataaggaagtgggcgaactggaggggaaggagaagaaaaatgga
tcgaaaggcatgatttcaaggactggttctgtgtcggggtttgaggacaatattttagag
caagtagagatgcctttggactgtgctgacctacaaagtataacccatatccgtcattgt
tcacttagtaccggtggcaatggcaggttgtacggtaatggaattggattagagaaatca
gttgaagaccgtcctaatgataggttactgtctggggtgctgaatggggttgataaagtt
gcacagatttcatcatcccatgatatgttttctgatcaaaacgcagtgccatttgtgaag
cagaaaagccttacaagtcaggcaaagaggacagtagaaacggaggcatcgggcaagaaa
gatgtgagtatgagaaggacctcatcttataatgaggctgtagtgtctgaagcatcattc
atggagattcttaagaagccggctcttcatggggcagaggtccccgtgtatggctctgct
tttgagccaccatcatctgatgttgcttcacaagctggacgaagtggcaagaaaaaaggg
aaaaagggaagacagattgatcctgccttgcttggttttaaggttacaagcaaccgcatt
ttgatgggtgagatccagcgtcttgacgattaa
DBGET
integrated database retrieval system
