Gossypium raimondii: 105802465
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Entry
105802465 CDS
T04129
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105802465
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105802465
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105802465
NCBI-ProteinID:
XP_012489573
UniProt:
A0A0D2S927
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All DBs
Position
11:57616372..57618178
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AA seq
454 aa
AA seq
DB search
MKITKAQLVFLFSFATLIPTLWGGGGNIADFDDVWKRRADQAWKNTLAAYEPSPENVTTK
FNENVHKALVANKSNKTKDLEGGDDRRNLRGKHKKYTGPCMATNPIDRCWRCRPDWAENR
KRLTQCVIGFGHRTEGGEKGKYYEVTDNSDDDPVNPKPGTLRFAVIQKRPLWIIFAHDMH
IKLSRELIVQSKKTIDGRGANVHIAHGAGITLQFVDDVIIHSIHIHHIGPSKAGLIRDSV
DHIGLRTTGDGDGINIFGSTNIWLDHLSMSEGQDGLIDAIQGSTAITISNCHFTHHNDVI
LLGASDTYERDKLMQVTVAFNHFGKELIQRMPRCRWGFFHVVNNDYTHWKMYAIGGSMHP
TIISQGNRFIAPDDPKAKEITNRNYAPQSEWSKWVWRSEGDLLLNGARFTKSGPDKSPHF
DFTKMQMIKAKPATFVRRLTRFAGALDCEKGNKC
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataacaaaggcccaactggttttcctgttttcatttgccacactaattccgaca
ctctggggtggtggtggcaatattgctgattttgatgacgtctggaagcgacgtgccgat
caggcatggaagaacactctggcagcttacgaaccaagcccagaaaatgtcaccactaaa
ttcaatgagaatgttcacaaggctcttgttgcaaataaaagtaacaaaaccaaggatttg
gagggtggtgatgataggaggaacttgaggggcaaacacaaaaagtacacgggtccatgc
atggccaccaaccccatcgataggtgctggcgatgcagacctgactgggccgagaaccgt
aagaggctgacgcaatgcgtgattggttttggccaccgaaccgaaggaggagagaaaggg
aaatactatgaggtgactgataattccgatgatgacccggtcaatcctaaacccggaact
ttacgttttgccgtcatccagaaaaggccattgtggatcattttcgctcatgacatgcac
atcaaattatcacgtgagctcattgtccaaagcaagaagacgatcgacggtcgtggagcc
aacgttcatatcgcgcatggagctggcatcacacttcaattcgtggacgatgtcatcatc
catagcattcatatccatcacattggtccaagcaaggctggcctaatcagggactcagtg
gatcatataggtttgaggacaacgggtgatggagatggcattaacatcttcggatccaca
aacatttggctcgatcacctttccatgtcggagggtcaagatggactcattgatgctatc
caaggttccactgccatcacaatctcaaactgccatttcacccaccataacgatgtgata
ctactgggtgcaagtgacacctacgaaagagataaactaatgcaagtcacagttgcattc
aaccattttgggaaagaactgatacaaagaatgccgagatgcaggtggggattctttcat
gttgttaacaatgattacacacattggaaaatgtatgcaattgggggtagcatgcatccc
accattatcagccaaggtaataggttcattgctccagacgatcccaaagccaaagagata
acgaacaggaactatgcaccccagtcggaatggagcaagtgggtatggagatcggaagga
gatttgttgttgaacggagcccgttttacaaaatcggggccggataaatctccccatttt
gacttcaccaagatgcagatgatcaaagccaagccagcaacatttgtgagaagactcacc
cgttttgctggggctcttgactgcgaaaaggggaacaagtgttag
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