Gossypium raimondii: 105802814
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Entry
105802814 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105802814 isoform X1
KO
K24155
rabconnectin-3a
Organism
gra
Gossypium raimondii
Pathway
gra04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105802814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105802814
Membrane trafficking [BR:
gra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105802814
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
105802814
RAVE complex
105802814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WDR55
Beta-prop_EML
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
105802814
NCBI-ProteinID:
XP_012490138
UniProt:
A0A0D2TD59
LinkDB
All DBs
Position
11:54840695..54855968
Genome browser
AA seq
2559 aa
AA seq
DB search
MAGAWATSTSQNATSISEVDPTDHLPLSLLRSELIPPAPNRSESAIDWLPDFAGYSWAAY
GSSSLLVISHFPSPLSTEQTRMGSIFRQVFEISSVASSPVTAVSWSPVTPSSGELAVTSD
NCICLFSHDSATPNPKGSFCWSQNAVLLQSTKVEAVGWTASGDGLIAGGLEVVLWKRKSK
SWEIAWKFKADQPQNMVSASWSIEGPSAAASSSKDLQIEGVNEASKSVLVFYSDGSSGFA
KTVLGHPQPVSMLQWRPSAGKQLLRDGKHLRRHILLTCCLDGTIRLWSEIDNVRVKKAGS
VYDQKTTRRSFCVAAVIEIDNALRGTLGADISFTWAMEIGGMVKTTEETNQYFFREEHKN
EVGSCEWLIGFGPGKLVTFWAIHCLDDISPMRFPRVTLWKRLELQGLEVEHLNRNGLSTL
KQQLLLKKVVIMRNCASGPPTVCSSIHLYPCKYLAWSMLYTQMINDTENAPPSESRTENL
LSCSVEGILDIDGHTSRILQVAIHPYVCEVDFVVSLDSNGLLLFWSLSNNSNAILDLPTL
IPAWRISGKHVTHGKCSKYSSLNWAPLVLGEDRFLLLGHVGGIDCFAVKNFHGEGDGIEC
YFICTIPFAGHDPYEDGPTNIYTVPLSLSRNETYMCDGFLLLGIWMKVFRALSWEITMHA
YDLTRSCSECNFNDDNIVECNARKFEKTISGTRYCLHVIPSSAQLPEPHLHDQVTSFAVI
SPGGLTPVQQKLPFHKDSLSCRSPAYVMATGCSDGSIKLWRCSPNEPSISHKSWELVGMF
SAHQGPVTAIRLTSCGRKIATTGSDSPSNTVFSLRIWDSIRLPDSGTFMLEDTLSLDEDV
VVLNWLALGNGQLLLAVCMRNELRVYAQKRCGGHALLDSKQSPGVQFWFCIGISHTFSAI
HDFLWGPRTTGVVVHASYLSLLSPWLFLLDNKHQTDFYKKFNPESLLDSDIDMGKDTFSE
IFSDHDVVNHKETLIANSNGGCKSDLLKKINTNNGHLSSAFLVGRGQIKCKSKILLGYWS
MLDIVETLARVLPVYHPESLFANIYSGNWKRAYISVKHLVEYLSSSHISEKRGHHPKISD
IVPQMPLSDYIEGILSKSSTGNAFQWNENATSMTLSSQFQSGLVPFAYNFEPNASSNAFS
SSSTKSGLIDFLEPINKLHELAAITATEKMQILAIVDLLNEVSNPQSASVYENLDDPGRR
FWVTLRFQQLLFLQRFGRSASLEDLVVDSGLIAWAFHSDCQETLFGSFLPNEPSWPAMRT
LGIGFWFTNATQLRTRMEKLARMQYLKKKDPKDCTLLYVALNRLQVLAGLFKISKDEKDK
PLVGFLSRNFQEEKNKAAALKNAYVLMGRHQLELAIAFFLLGGDTSSAVTVCAKNLGDEQ
LALVICRLVEGRGGPLERHLITKLILPSAIERSDYWLASLLEWELGNYSQSFLTMLGLQV
GSAIGSSTLSSCHVAFMDPSRGLYCLMLANKTSLRNAAGDQNAGVLARWASLMTATSLNR
CGLPLEALECLSSSLSILGGMNQENVSDFACSKTSLGILKPSIGGSSPWLLGGVASHLES
YAKFDLALQYISKLMREHPSWPRTSFGSVRTNTCSEDYENQYDELLENFHHKLHTGLAQF
EHKFSLVSSYLINMIFVTLCNNGFWFLGYDMLHGFCHEHSQHENHMDDNAVWYPLFHKPL
LKLTEDISSLFSHFLAVCSTTWSPSKLCYRENGISHEGRSNSGDTWGFYFQGVKLSLSSL
RAAMRIFSGIFKEVMSPKLLTLLDLYEFYANFASAWLQKNSEGLVLMMQPLIVTYTSGHT
PYEVDMTALKETLNQVPDTVTDVLIDGLEVDRCAEEKQVGELLNLIPEDERWHIIGAFLW
QHMSRFMKHKLNSLAISDDSYLSGFSNDKLSSCAPLSLDVGLGNRSIRENIRSASWILAN
LLKIALEHISSHHVKQLGLFLQQKIDNGFNPPTLGWLEEYRSSSRTLQQHLGQTKDTNST
NQLSASDILWNMCADPTMISESFAQEKVNWSSFLHFKPCRGWDDLYKDIRRENETDESQN
HEGKISNSSSGGEAGSPSRSVLWNGHAFLSSWQKGTSTEKEVIPFQNPKEIYKRNGELLE
ALCVNSINQRQAALASNRKGIIFFNWEDGIPYKGQSDYIWSGADWPHNGWAGCESTPVPT
CVSPGVGLGNQKGAHLGLGGATIGVDTFSRPGRHLTGGGAFGIPGYAGIGASGLGWETQE
DFEEFVDLPATVENISTRSFSSHPSRPLFLVGSINTHIYLWEFGKDKATATYGVLPAANV
APPYALASISALQFDRCGHRFVTAALDGTVCTWQLEVGGRSNIRPTESSLCFNNHASDVT
YITSSGSVIAAAGCSSNGVNVVIWDTLAPSATSRASIVCHEGGARSIAVFDNDIGSGSVS
PLIVTGGKNGDVGLHDFRYIATGRTKRHRHHDSVEISINTSSNADMKTGASKQRDQNHGG
MLWYIPKAHLGSITKISTIPNTSLFLTGSKDGDVKLWDAKAAKLVHHWSKLHERHTFLQP
SSRGFGGVVRAAVTDIQVVSHGFLSCGGDGSVKLVQLND
NT seq
7680 nt
NT seq
+upstream
nt +downstream
nt
atggctggggcatgggcaacttccacttctcaaaacgcaacctccatttccgaggtggat
cccaccgatcacctcccgctgtccctccttagatctgagctcatcccgcctgctcctaat
cgatccgaatccgccatagactggttacctgactttgccggttactcatgggcagcttac
ggatcctcctcccttctcgtgatctctcacttcccttctcctctctccaccgaacaaact
cgtatgggctcaattttccgtcaagtcttcgagatctcttctgtcgcttcttcccctgtt
accgccgtttcgtggtctccggtcacgccttcttctggcgagctcgcagtgacctcggat
aattgcatttgcttgttctctcacgactcagcgacgcccaatcccaaaggttctttttgt
tggagccagaatgcagtacttttacagtctactaaagttgaggcagttggatggacggct
tctggggatgggctaatagccggtggactggaggttgttttgtggaaaaggaagagtaaa
tcttgggaaatagcttggaaattcaaagcagatcagcctcagaatatggtttctgcctcc
tggtcaatagaaggcccttccgcagctgcatcttcttcaaaggatttgcaaattgaagga
gtcaatgaggcaagcaagtctgttttggtattttacagtgatggaagttctggatttgca
aaaactgtgctaggccatcctcaacctgtttcaatgcttcaatggaggccatcggcaggg
aaacaactgttgagagatggaaaacatttgcggagacatatattgttaacatgctgttta
gatggaactataagattatggagtgagatagacaatgttagagttaagaaagcaggcagt
gtttacgatcagaaaactacaaggaggtcattttgtgttgctgctgtaattgagatagat
aatgcattacgtggaactttgggagcagatatatcttttacatgggcaatggaaattggt
ggcatggttaaaaccactgaagaaactaaccaatacttctttagagaagaacataagaat
gaagttggcagctgcgagtggttaatagggtttggccctggaaaattggttactttctgg
gcaatccattgtcttgatgacatatcaccaatgaggttcccccgggttacattgtggaag
agactggagcttcagggccttgaagttgaacatcttaatagaaatggactttcaactcta
aagcaacaattgcttcttaaaaaggttgttatcatgagaaattgtgcgtctggaccccca
actgtatgctcttctatccatttatatccgtgtaaatatttggcctggtccatgttatat
acccaaatgataaatgatacagagaatgcacctcctagtgaatctaggactgaaaattta
ttatcatgttcagtagaaggaattttagatatagatggtcataccagtagaatcttacaa
gttgctatacacccctatgtttgtgaagttgatttcgttgtttctttggattctaatggg
ctacttctgttttggtcactttctaacaattcgaatgccattcttgaccttccaacattg
attcctgcatggagaattagtggaaagcatgtaacccacggtaaatgttctaaatattca
agcttgaattgggcacctttagtattgggtgaagatcggtttcttcttctgggacatgtt
ggaggaattgactgctttgcagtaaagaattttcatggtgaaggagatggcatagaatgt
tacttcatatgcactataccttttgcaggtcatgatccttatgaggatggtccaaccaac
atatatacagtaccattgtctttgtctcgtaatgaaacttatatgtgtgatggattttta
cttttgggcatttggatgaaagtatttcgggctctttcctgggaaataaccatgcatgct
tatgatctgacaagaagctgctctgaatgtaatttcaatgatgataatattgttgaatgc
aacgcaaggaaatttgaaaaaactatttctggcacaagatattgtcttcacgttattcca
tcatcagcacagttgcctgaacctcatcttcatgatcaggtcacaagttttgctgtgatc
tctcctggtggtttgacacctgtgcagcaaaagttaccttttcataaagattccttaagt
tgtagaagtcctgcatatgttatggccacaggctgctctgatggtagtataaaattgtgg
agatgtagccccaatgaaccatcaatttctcacaaatcatgggaacttgtgggcatgttt
agtgcacatcaaggacctgtcactgctatacgattgaccagttgtggtaggaagattgca
accactggctcagatagtccgtcaaatactgtcttcagtcttcgtatatgggactctata
cgcctaccagactcggggacttttatgttagaagacacattgtcacttgatgaagacgtt
gttgttttaaattggttagccctaggaaatggtcagttattacttgcagtttgcatgcgc
aatgagttgcgtgtatatgctcagaagcgatgtggtggtcatgctttgttagactctaaa
caatctccgggtgtgcaattctggttttgcatcgggatcagtcatactttttctgctatt
catgatttcttgtggggccccaggactacaggtgtggttgtgcatgctagttacttgagt
cttttaagtccatggctgtttcttttagataacaaacatcagactgatttctataaaaaa
tttaacccagaaagccttcttgattctgatattgatatgggcaaggacacattttctgaa
atttttagtgatcatgatgttgttaatcacaaagaaacattaattgcaaatagtaatgga
ggatgcaagtccgaccttcttaagaagataaataccaacaatggtcacctatccagtgca
tttttagtgggaaggggtcaaataaaatgcaagtcaaagattttactcggttactggagt
atgctagacatagtggagacattagccagagttttgcctgtttatcacccggagtcactc
tttgcaaatatatattcaggcaattggaaacgtgcatacatctctgtgaagcatctggtt
gaatatcttagttccagtcatatttccgagaagagaggtcaccatccaaagatcagtgac
attgttccgcagatgcctttatctgattacattgaagggattctctccaaaagttcaact
ggtaatgcattccaatggaatgagaatgctacttcgatgacattgtcttcacaatttcaa
agtggcttggtgccgtttgcttataattttgagcctaatgcttccagcaacgcattcagc
tcgtcttcaacaaaatctggacttattgacttccttgaaccaatcaataagttgcatgag
ttggcagctataactgccacagagaagatgcagattcttgcaatcgtagatcttctaaat
gaagttagcaatccacagtctgcttctgtttatgaaaatcttgatgatccaggtcgaagg
ttttgggtcacattaaggtttcagcagctgctttttttgcaaaggtttggtagatcagca
tctttggaagatcttgtggttgactcagggcttatagcatgggcattccactccgattgc
caggaaactctgtttggttcatttctaccaaatgaaccatcttggccagcaatgcggacg
ttgggcattggattttggtttactaatgcaactcaactgcgcacaaggatggaaaagctg
gctagaatgcaatatcttaagaagaaagatcccaaggattgtacactgctgtatgtagca
ttaaatagacttcaggttttggctggtctatttaaaattagcaaggatgagaaggataaa
ccattggttggatttctttcacgcaattttcaggaggagaaaaataaggcggcagctttg
aaaaatgcttatgtcttgatggggagacatcaactagagttggctattgctttttttctg
cttggaggtgatacttcttctgcagttactgtttgtgcaaagaaccttggggatgagcag
ctagcactagtaatatgtagacttgtcgaggggcgaggtggaccattagagcgtcacttg
attactaagcttatacttccatctgcaattgagagaagtgactattggcttgcaagcctt
ctagagtgggaattggggaactactctcaatctttcctgaccatgcttggtttacaagtg
ggttctgctattggttcatccactctttcatcctgccatgttgctttcatggaccccagt
agaggtctgtattgcctcatgcttgcaaacaaaactagcctgagaaatgctgcaggggac
cagaatgctggagttcttgctagatgggcatctttgatgactgctacttccttgaacaga
tgtgggcttcctcttgaagccttggagtgcctttcatcttccctgagtattctggggggt
atgaatcaagagaatgtatcagattttgcatgttctaaaacttcactgggaattttgaaa
ccttctattggtggttcctctccttggctcttgggtggtgttgcttctcatcttgagtca
tatgctaaatttgatttggccctccagtatatctcaaaattgatgagggagcatcctagt
tggcctagaacctcctttggatctgttagaacaaacacatgttctgaggattatgagaat
caatatgatgaactacttgaaaattttcaccataagttgcacacaggacttgcacagttt
gagcataagttctcgttggtttcatcctatctaattaatatgatttttgtcaccttatgc
aataatgggttctggttccttggatatgatatgttacatggattttgtcatgaacactcc
cagcatgagaatcatatggatgacaatgccgtttggtatcctcttttccacaagccactt
ttgaagttgactgaggatatctcctctttgttttcgcattttcttgctgtctgcagcaca
acatggtccccatcaaaattatgttatagagaaaatggtatatcccatgaaggtagatcc
aactctggagatacctgggggttttattttcaaggggtcaaactctcactgtcgagttta
agagcagctatgaggatcttctctggcatcttcaaagaggtcatgtccccaaaacttctc
acccttcttgatttgtatgaattttatgcaaattttgcatctgcttggcttcagaaaaat
tcagaaggtttagttttgatgatgcaacctctcatagttacatatactagtgggcatact
ccttatgaagttgatatgacggctttgaaggaaacgttaaaccaggttccagatacagtg
actgatgttttaatagatggccttgaggttgatagatgtgctgaggaaaaacaagttgga
gagctattgaatttgattccagaggatgagagatggcatattataggggcttttctgtgg
caacacatgtccagattcatgaaacataagttgaactcattagccatttctgatgacagt
tatctttctggcttttccaatgataaactttcttcttgtgctcctttatcattggatgtt
ggattaggtaacagaagcataagagaaaacattaggtcagcatcatggatattagccaac
ttactgaaaattgcccttgaacatatttcttctcaccatgtgaagcaacttgggttgttc
ttgcagcagaaaatagataatggatttaaccctcctactcttggttggttggaggagtat
agatcgtcttctaggactctacagcagcatctgggtcagactaaagatacaaacagcaca
aatcagctttctgcttctgatatcttatggaatatgtgtgctgatcctactatgatatca
gaaagttttgcacaagagaaagtaaattggtcaagttttcttcattttaagccttgcaga
ggatgggatgatttatacaaagacattaggagggagaatgaaactgatgagtcccaaaat
catgaaggcaaaataagcaatagctcttctggtggtgaagctggatcaccttctaggagt
gtgttatggaacggccatgcttttttaagttcctggcagaaaggaacaagcacggaaaag
gaggtcatacctttccaaaaccctaaagaaatatataagagaaatggggagcttctagag
gcattgtgtgtcaactccattaatcaaaggcaagctgcattggctagcaaccgaaagggc
ataattttctttaactgggaagatggtataccttacaaaggccaatcagattatatctgg
tctggtgcagattggccacacaatggttgggctggttgtgaatcaaccccagttccaacc
tgtgtatctcctggtgttggtcttggtaatcagaaaggggctcacctaggactgggtgga
gcaaccattggtgtggatactttttctagaccagggagacacctaacaggtggtggagca
tttggaattccaggttatgctggtatcggagcctctggcttaggctgggagacacaagag
gattttgaggagtttgttgatctgcctgccactgtggaaaacatcagtacgaggtctttc
tctagtcatccctcaaggcctttattcctggttggttctatcaatacacatatttactta
tgggagtttgggaaggataaagcaacagcaacttatggagtgctgcctgctgcaaatgtt
gctccaccttatgctcttgcctcaatatcagctttgcagtttgaccgttgtggacacaga
tttgttactgctgctcttgatggaactgtttgcacgtggcaactagaggtgggaggcagg
agcaatatccgtccaaccgaatcatctctctgctttaataaccatgcatcggatgtcact
tacattacttcaagtggatctgtcattgctgctgctggatgtagctccaatggtgttaat
gtggttatatgggatacattggctccgtctgcaacctctcgagcttccattgtttgccat
gaaggtggtgcccgctccattgcagtgtttgacaatgacatcggaagtggttctgtttct
cccctaatagtaaccggtggtaaaaatggtgatgttggacttcatgacttccggtacata
gctactggaaggactaaaaggcacaggcaccatgatagtgttgaaataagcatcaacaca
tcttctaatgctgacatgaaaacaggagctagtaaacaacgagaccaaaatcatggtggg
atgctttggtacataccaaaggctcacttaggtagcatcaccaaaatttctaccatccca
aataccagtttgttcttaacgggaagcaaagatggagatgttaaactttgggatgccaaa
gcagccaaactggttcatcattggtcaaaattgcatgaaaggcacacctttttgcaacca
agttcccgtggtttcggtggcgttgtgcgggctgctgttactgatattcaagttgtgtca
catggttttctttcatgtggtggagatggctctgtaaaactggttcaactcaatgattaa
DBGET
integrated database retrieval system
