Gossypium raimondii: 105802831
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Entry
105802831 CDS
T04129
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105802831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105802831
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105802831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
105802831
NCBI-ProteinID:
XP_012490162
LinkDB
All DBs
Position
7:complement(7471725..7474977)
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AA seq
475 aa
AA seq
DB search
MSENGKLFIGGISWETNEERLKEYFSSFGEVVEAMIMKDWTTGRARGFGFIVFSDLAVAE
KVIKEKHNIDGRMVEAKKAVPRDDQNIMSRSTSSIQGSPSLCRIRKIFVGGLASTVTDSD
FKKYFDHFGNITDVVVMYDHNTQRPRGFGFVTYDSEEAVDKVLLKSFHELNGKMVEVKRA
VPKELLPGPCRSPLVGYNCGLNRVNNFLSGCTQGYTPSNIGGFGLRTDGRFSTVPGGRSG
FPPCGSGYGMGMNFEPGLNPSFGNSANFSSNMNYGRGLNPYYIGNANRFGSPIGYDGSTG
GNTSFFSSVTRNLWGNGGLNYNTNGSSSNAYIGSGSVSIGGSAFGNSGINWSSAIANQDE
GSNVSNNSVHFAYGSADDSFRLGIVGYGRNNGTNVAPTSSYASNFGYDVAFTDLYGGASA
YGDITWRSSTFKRDGSGSFGYGLGSATSDVSGKISPGYVSSHKVNKRQASRGIAT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaatggtaagctatttattggtgggatatcttgggaaaccaatgaagagcgt
cttaaggagtatttcagtagttttggtgaagtggtagaggcgatgatcatgaaggattgg
accacaggacgtgctcgaggtttcggtttcattgttttctctgacctagcagttgctgag
aaagtcatcaaggagaaacataatattgatgggagaatggttgaggcaaaaaaggcagtt
cctagggatgaccagaacattatgagtagaagcactagtagcatccaaggttcacctagt
ctatgccgcataagaaagatttttgttggaggtttagcatcaacagtcacagatagtgac
tttaagaagtattttgatcattttgggaatatcacagatgttgtagtgatgtatgatcac
aacactcaaaggcctaggggtttcggattcgttacttatgattcagaagaggcagtggac
aaagtgttgctaaaaagtttccatgaacttaatggtaaaatggtcgaggttaaacgagca
gtgcctaaagaattattgcctggcccttgtcgtagtcccctcgttggatataactgtggt
ctgaatagggttaacaactttcttagtggctgtactcagggatatactccaagcaatatt
ggaggctttggacttaggacagatggtagatttagtacagttcctggtggtcgaagtggt
tttcctccttgtggttctggttatggaatgggcatgaactttgagcctgggttaaaccca
agttttggaaatagtgcaaattttagtagtaatatgaactatggacggggattgaatcct
tactatattggtaatgcaaatagatttggtagccctattgggtatgatggaagtactgga
ggtaatacttccttttttagctcagtgactcgaaacctttggggaaatgggggactcaat
tataacacaaatggttctagttccaatgcatatataggatctggaagtgttagtatagga
ggaagcgcctttggaaatagtggaattaattggagttctgcaattgccaatcaagacgag
gggagtaatgtttctaacaatagtgtgcatttcgcttatggaagtgctgatgacagcttt
aggttagggatagtagggtatgggagaaataatgggaccaatgtggcgccaacatcatca
tatgcatcaaattttggttatgatgtagcctttacagacctttatggtggtgcttcagct
tatggggatataacttggcgatcatcaacatttaagcgagatggttctggttcttttggc
tatggacttggtagtgccacttctgatgtttcaggcaaaatttctcccggctatgttagt
agtcataaagttaataagagacaagcaagtagaggaatcgctacctag
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