Gossypium raimondii: 105802916
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Entry
105802916 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase hel2
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105802916
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105802916
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105802916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
105802916
NCBI-ProteinID:
XP_052480488
LinkDB
All DBs
Position
11:53799041..53801883
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AA seq
542 aa
AA seq
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MDDSCVVCADNLEWVAYGACGHRDVCSTCVARLRFICNDRRCCICKTESNVIFVTKALGD
YTRMINDFSVLPTEVRAGRVGSYWYHEDTHAFFDDVDHYRMIKAMCRLSCSVCDKIEEQS
NAGIKRRGKFRNIEQLKGHLFHQHRLVMCSLCLEGRKVFICEQKLYTRAQLNQHINTGDS
EVDGTESERGGFMGHPMCEFCKSPFYGDTELYSHMSTEHYTCHICQRQHPGQYEYYKNYN
DLEIHFLRDHYLCEDETCLAEKFIVFQSEAELKRHNTIEHGGRMSRAQRSAALQIPTSFR
YRRRNDDTRRGRERTTRYEPSDNDHQLSMAIEASLETASDPPASSSTQADSDCGDINDIY
PLVQPFELLSAAVCESSSRYLQALGGGSRVAPLQGTSFPPLSTPASTSQQTPKHSSDGLP
INTMAAHLRRQKNANTNVLSSAQEWPETRHRLLQAASRSSQVRPATNVAAETSLGNSNGF
PQLSSASSAGRWSMAATLNLKVSEPDPDPEALDNNLDSSQISTGQLPVRGVWKKEVRNSF
RK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagctgcgtggtttgtgctgacaatttggaatgggttgcatacggcgcgtgt
ggtcaccgagacgtgtgctccacgtgtgttgctcgtctccgcttcatctgcaacgatcgt
cgttgctgcatctgcaagactgagtccaacgtcatctttgtcactaaggctctaggggat
tacacgaggatgatcaatgatttctctgtattgccaactgaagtaagggcaggccgggtg
ggttcatactggtaccatgaggatacacatgcattttttgatgatgttgatcactacagg
atgatcaaggcaatgtgcaggctttcttgcagtgtatgtgacaaaatagaagagcaatcc
aatgctgggatcaaacggagaggaaaatttaggaacattgaacagttaaaaggccatttg
tttcatcagcacagattggttatgtgcagcctgtgtttggaaggtcggaaggtatttatc
tgtgaacaaaagctatatactagggcacagttaaatcaacatataaacacaggtgactca
gaggtggatggaactgagagtgagagaggtggcttcatggggcatcccatgtgtgaattc
tgcaagtctccattttatggtgatacagagttatactcacacatgtccacagagcactat
acatgtcatatctgccaaagacagcatcctggacaatatgaatattacaagaactataac
gaccttgagattcattttctccgagatcattacctatgtgaggatgagacgtgccttgcc
gaaaaatttattgtctttcagtctgaagctgaactaaagaggcataataccattgaacat
ggaggtcgcatgtctcgtgcacagcgcagtgctgctttacaaataccaacaagctttcga
tatcgtcgaagaaatgatgatactcgtcgtggaagggagagaacaactcggtatgagcca
tctgataatgaccatcaactttcaatggccattgaggcaagtttggagacggccagtgat
ccaccagcatcatcttctacgcaggcggactctgattgtggagacataaatgatatttat
ccacttgtccagccttttgaattgttatctgctgcagtttgtgaatcatcttctagatac
cttcaagcattagggggaggttctagggttgcacctttgcaaggaacatcttttcctcct
ctctccacgcctgccagcaccagtcaacaaacacctaaacatagctcagatggcttgcct
attaacactatggcagcgcatctaaggcgccagaagaatgcgaatacaaatgttttgagt
tcagcccaggaatggccagaaacaagacacaggcttctacaagcagcaagcagatcaagt
caggttagaccagcaacaaatgttgcagctgaaacatcacttggaaatagtaatggattt
ccgcagttaagctctgcaagttcagctgggcgatggtcaatggcagcaacgttgaaccta
aaagtttctgagccagaccctgatcctgaagcgttagataacaatcttgatagcagccaa
atctccactgggcaattgcctgtacggggtgtttggaagaaggaagtaagaaactctttt
cgtaagtga
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