Gossypium raimondii: 105802931
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Entry
105802931 CDS
T04129
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105802931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105802931
03036 Chromosome and associated proteins [BR:
gra03036
]
105802931
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105802931
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105802931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
105802931
NCBI-ProteinID:
XP_012490298
LinkDB
All DBs
Position
7:7260647..7268074
Genome browser
AA seq
1325 aa
AA seq
DB search
MFSPGLKRSKLSSQKERNVGANLRAPDSPSTPLTENNKPAHQASIPDRPSTGTPAPWAPR
LSVLARIPPANKNDKGDGVDPIKPVFVGEFPQVVHDEQTSFLQRRVPADFCISGGMDKGT
CLSWIIYGNKIFIWSYLSFTAPKKCVTLELPSDVLGNADLGRNSYLRNNWLLSVVNWDST
LKVTNRAANHCYSAGIVLCNQKTRAVLYWSDIFADVGAAPVTICSSSDELLVTSSCIDSN
ATPNRHATNFTGSSSFNSLIASAIPGTQNACVALACCSSGELYQFYCSPNGIQVNKVHQN
IQSLSSQGTGVGQLVGSKGYPRSMIWRLPYFSVSDCNRQFFLLTDHEIQCFNIKLFPDLE
VSKLWSQEIVGNDGDLGIKKDLAGQKRIWPLDLQVDDHGKVITVLVATFCKDRVSSSSYT
QYSLLTMQYMSEVNISSDLHERVLEKKAPIQVIIPKARVEDEDFLFSMRLRVGGKPAGST
IVLSGEGTATVSHYHRNSTRLYQFDLPHDAGKVLDASVLPPTDDGEDGAWVVLTEKAGIW
AIPEKAVVLGGVEPPERSLSRKGSSNEGSAQEERRNLMFANNIAPRRASSDAWDAGGRQA
TGLTGITRRTAQDEESEALLCQFFHEFLITGKVDGSLEKLKSSGAFERGGETNVFVRTSK
SIVDTLAKHWTTTRGAEIVAMGIISTQLMDKQQKHNKFLQFLALSKCHEELCSGQRHSLQ
IILEHGEKLSAIIQLRELQNAINQNRSTGVGSTHSSFENQVSGALWDLIQLVGERARRNT
VLLMDRDNAEVFYSKVSDLEQVFYCLERHLEYIISMEQPDGFQIHRACELSNSCVTIFRA
AMDYKNENHLWYPPPEGLTPWYCQPVVRNGLWSIASFMLQLLKETSEIDMSAKSELYSHL
EALAEVLLEASSGAINAKVERGEEHKGLLNEYWSRRDAILDSLYQQVKGFVEAGHQDLTD
NTGENKEEILKNLSSSLLSIAKRHEGYQTMWNICCDLNDSGLLKNLMHESMGPRCGFSYF
VFKQLYGKKQYSKLLRLGEEFQEELSIFLNHYQDLLWLHEVFLHRFSAASETLHVVALSQ
DEGSISITEEEIDSDHTNPVPTLTDRRRLLNLSKIAAFAGKDADSQIKAKRIEADLKILR
LQEEIMEVLPMDDTNQHVEKKLLHPEELIELCLESGSKELALQVFDVFAWTSSSFRKSHR
NLLEECWKKAADQDPWSELYQASVSEGWSDEETLQQLSRTILFKASNRCYGPKAETIEDG
FGEVLPLRQENVEVAGLKDARSSVEAILMQHRDFPYAGKLMLTALMLGCVQGDDVKLEES
LSPMV
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgttctccccaggattgaagcgaagcaaattaagctcgcagaaggagagaaatgtaggg
gcaaatctaagggcaccagattctccatcaactccacttacagagaacaataaaccagcg
caccaagcttcgattccagatcgcccaagtaccggcactcccgctccttgggctcctcgc
ttgtctgttcttgccagaattcctccagcaaacaagaatgataaaggggatggggtggat
ccgattaagccagtttttgttggagagtttccacaagttgttcatgatgaacagaccagc
tttttgcagaggcgtgttcctgctgatttttgtatatcaggcggaatggataagggaaca
tgcctatcatggattatatacgggaacaaaatttttatctggagttatttgtcattcaca
gctccaaagaaatgtgttactcttgaacttccttctgatgttttaggaaatgcagatctt
ggcagaaattcctatctccgcaataattggttgctttctgttgtcaattgggatagcacc
ttgaaagtaacaaatagagctgcaaaccattgctattctgctggtattgttttgtgtaac
cagaaaactcgagctgttttatactggtctgatatctttgctgatgtgggagctgctcct
gttaccatttgttcatcttctgatgaattattggtaacttcttcatgtattgacagcaat
gccaccccaaacaggcatgcaacaaattttactggctcaagttctttcaactctttgatt
gcttctgcaattcctggtacccaaaatgcctgtgttgcccttgcatgttgttctagtggt
gaactttatcaattttactgcagcccgaatggtattcaagtaaataaagtacaccagaac
atacaaagtttatcatcccaaggcactggtgttggtcaacttgttgggagcaagggatat
ccgaggtcaatgatatggcgtcttccatacttttctgtttcagactgcaaccgccaattt
tttctgctgacagatcatgaaatacagtgtttcaacatcaagctctttcctgatttagag
gtgtcaaagctttggtctcaggaaattgtgggtaatgatggtgatttgggaattaagaag
gatctggctggacaaaaacgaatctggcctctagacctgcaggtggatgatcatggtaaa
gttattactgttcttgttgccaccttctgcaaggatcgggttagcagctcaagttacact
caatattctcttctgaccatgcaatatatgtctgaagtgaacatctcctctgatttacat
gaaagagttttagagaaaaaggctccaatccaagtgataataccaaaagccagggtagag
gatgaggacttcttattctccatgagacttcgagtagggggcaagcccgcaggatcaaca
atcgtactttctggtgaaggaactgcaacagtctcccattatcacagaaattctactcga
ctctatcaatttgatttgcctcatgatgctgggaaagttcttgatgcttcggttcttcct
cctactgatgatggggaagatggcgcatgggttgtgcttaccgagaaagcagggatatgg
gcaataccagaaaaggctgttgtacttggtggggttgaaccccctgagcggagcttgtca
cgcaaagggagctcgaatgaaggctctgcacaagaagagagaaggaaccttatgtttgca
aacaatattgctcctagaagggctagttcagatgcatgggatgctggtggtagacaagca
actggtttgactggtattacacgcagaactgcccaagatgaagaatcagaagctttgcta
tgtcaatttttccatgagtttctgataactgggaaggttgatggatcactagaaaaactt
aagagttctggggcatttgaaaggggtggagaaactaatgtctttgtacggacaagcaaa
tcaatcgttgacaccttagctaaacactggacaactactagaggtgctgaaattgttgct
atgggtattatatcgactcagctcatggataagcagcagaagcataacaaatttctccag
tttcttgctttatccaagtgccatgaggagttatgttctggacagagacattctttgcaa
atcatcttagaacatggtgaaaagctctctgcaattattcaactcagggagctacagaat
gcaattaaccaaaaccgttcaactggagttggctccactcattcaagttttgaaaatcaa
gtttcaggtgctctttgggatctgattcagttagtaggggagagggccaggcgaaatact
gtccttctgatggacagagataatgctgaagtgttctatagtaaggtctctgatctcgaa
caagtattttattgcttagaaagacatctagaatatataatcagcatggagcaaccagat
ggatttcagatccatagagcttgcgaactctcaaattcatgtgttactatatttcgcgct
gccatggactacaagaatgagaatcacctatggtatccaccaccagagggtttaacgcct
tggtattgtcaaccagtggtgcgtaacgggctgtggagtattgcgtctttcatgcttcag
ctgttaaaagaaacatctgaaattgatatgtcagcaaaatcagaactatattctcatctg
gaagcattggctgaagttcttcttgaggcgtctagtggtgctataaatgctaaagttgag
cgaggagaagagcacaaaggtcttctgaatgagtactggagtagaagggatgcaattctt
gattccctttatcaacaagttaaaggttttgtagaagctggtcatcaggacttaactgat
aacacaggagagaataaagaagaaatccttaaaaatctgtcttcaagcttgctgtcaata
gcaaaacgacatgaaggctatcagaccatgtggaacatatgttgtgatctcaatgattca
gggttgctcaaaaatcttatgcatgagagcatgggacctagatgtggattcagttacttt
gtgtttaaacagctgtatggaaagaagcaatactctaagctactaaggcttggggaggaa
ttccaggaagagctatctattttcttaaatcattaccaggatctcctatggcttcatgaa
gtattccttcatcggttttcagcagcttcagaaactcttcatgttgtggctctttctcaa
gatgagggctctatttcaatcactgaagaggagatcgattctgaccacacaaatccagta
ccaacattgactgacaggcggcgacttttgaacctctccaagattgctgcctttgcaggt
aaagatgctgactctcagataaaagcgaaaagaatagaagctgatttgaagattttgaga
ttgcaggaagaaattatggaagttctacctatggatgacacgaaccaacatgttgaaaag
aagctccttcatcctgaggagctcatagagctgtgtctcgaaagtggaagcaaagagcta
gctttgcaggtttttgatgtatttgcatggactagctcatcatttcgcaagagccatagg
aaccttttggaggagtgctggaagaaggctgccgatcaagacccttggagcgagctatat
caagcatcagtatctgaaggttggagcgacgaggaaactttgcaacaacttagccgaact
atccttttcaaggcttcaaacaggtgttatggtccgaaagcagaaaccattgaagacgga
ttcggtgaagtgctgccattgagacaagaaaacgtagaagtagctggtttgaaagacgca
cgatcatccgttgaggcaatattgatgcaacatagggatttcccatatgcaggtaagcta
atgcttactgccctaatgctaggatgtgtacaaggggacgatgttaaattagaagagagc
ctttccccaatggtttga
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