Gossypium raimondii: 105803033
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Entry
105803033 CDS
T04129
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105803033
Membrane trafficking [BR:
gra04131
]
Autophagy
Other autophagy associated proteins
Others
105803033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
BCAS3_WD40
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_RSE1_2nd
DUF7099
Beta-prop_TEP1_2nd
Med16_N
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
105803033
NCBI-ProteinID:
XP_012490423
UniProt:
A0A0D2QRS5
LinkDB
All DBs
Position
11:52777455..52781155
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AA seq
418 aa
AA seq
DB search
MATLSASPSPNPNPNFRSPTDQTDHDPESLPHMELHPSSDQDPTPNSNPNFHAVLPTPPE
AIAPAAAAAPSLLHISFNQDHGCFAAGIDHGFRIYNCDPFREIFRRDFDRGGGIGVVEML
FRCNILALVGGGPDPQYPPNKVMIWDDHQSRCIGELSFRSEVRSVRLRRDRIVVVLEQKI
FVYNFADLKLLHQIETIVNPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA
HDSRIVCFALSQDGQLLATASSKGTLVRIFNTVDGSLLQEVRRGADRAEIYSLAFSSNAQ
WLAVSSDKGTVHVFSLKINGGSPGIDRSQSASDPVTSPHSSLSFIKGVLPKYFSSEWSVA
QFRLVEGSQYIVAFGHQKNTVVILGIDGSFYRCQFDPVNGGEMTQLEYHNFLKPEAAF
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggctaccctttcagctagccctagccctaaccctaaccctaacttccgttccccaaca
gaccaaaccgaccacgacccggaatctctacctcacatggagcttcacccttcttctgac
caggaccccacccccaactctaaccctaatttccacgccgttcttccgactccacccgag
gcgattgctcctgcagcggcggcagcgccctctcttctccacatctccttcaaccaggac
cacggttgcttcgccgccgggattgatcatggcttccggatttacaattgcgatccattc
cgcgagatatttcgccgggatttcgatcgcgggggcggtattggagtcgttgagatgctt
ttccggtgcaatattttggctcttgttggcggtggacctgacccgcaatacccacccaat
aaggttatgatatgggacgaccatcagagccgatgcatcggcgaactttcgttccgttcc
gaagtaagatcggttcggcttcggagggatcgaatcgtagttgttttggaacaaaagatt
ttcgtctacaatttcgcggatttgaagctgttgcaccagattgagactatcgtaaatcct
aagggactctgcgcggtttctcagggggttgggtccttggttttggtttgccctggattg
caaaaggggcaagttagggtggagcattacgcctcgaagaggaccaagtttatcatggct
catgattcaagaattgtgtgcttcgcgctttcgcaggacgggcagttgcttgctaccgct
agctcgaaagggacgctggttcgaatttttaatactgttgatggtagcttgctgcaagag
gtaagaaggggggcagatagagctgaaatttatagtttggcgttctcttcaaatgcccag
tggttagcagtttcaagtgacaaaggcacagtccatgttttcagccttaagattaatggt
ggatctccaggtattgacaggtcacaaagtgcttccgaccctgttacatcaccgcattcc
tctctttcttttatcaaaggtgtgttacccaagtacttcagttcagagtggtcagtggct
caattccgcctggttgaaggttctcagtacattgttgcttttggtcatcaaaagaataca
gtggtaattcttggcattgatggaagcttctaccgatgccaatttgacccggtgaatggt
ggggaaatgacccagctggaatatcacaactttctgaagcctgaggcagctttctaa
DBGET
integrated database retrieval system