Gossypium raimondii: 105803049
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Entry
105803049 CDS
T04129
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1 isoform X1
KO
K14485
transport inhibitor response 1
Organism
gra
Gossypium raimondii
Pathway
gra04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105803049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105803049
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105803049
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
105803049
NCBI-ProteinID:
XP_012490452
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Position
11:52567438..52571063
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AA seq
589 aa
AA seq
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MQKEMAYSFPDEVLKHVFSFIQSDKDRNAVSLVCKSWYEIERWCRRKVFIGNCYAVSPRM
VIRRFPEVRSIELKGKPHFADFNLVPDGWGGYVLQWIAEMAGAYPWLGEIRLKRMVVTDE
SLELIAKSFKNFKVLVLFSCEGFSTDGLAAIAASCKNLRELDLRESEVDDLSGHWLAQFP
ETCTSLVSLNISCLGSDEVSFSALERLVDRCPNLRSLQLNRAVTLDKIANILRRAPQLVD
FGTGNYAAELQPDVFSNLAGAFSSCKELKSLSGFWDVVPAYLPALYSICPRLTSLNLSYA
TIQSPDLIKLVSHCPRLQRLLFLIQVLDYVEDSGLEELASSCKDLQELRVFPSDPFGVEP
NVSLTEQGLVAVSLGCPKLQSVLYFCRRMSNAALVTIAQNCPNLTRFRLCIIEPKTPDYL
TLEPLDAGFGAIVEHCKDLRRLSLSGLLTDHVFEYIGTYGKKLEMLSVAFAGDSDLGLHH
VLSGCESLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCAVSFGACKLLGQKMPKLNV
EVIDETEPPDSRPESYPVDKLYIYRSVAGPRFDMPPFVWSMDEAVKILH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaggaaatggcgtattcgttcccagatgaggtgctgaagcacgtcttctcgttc
atacaatcagataaagaccgaaacgcggtgtcactggtgtgtaaatcgtggtacgaaatc
gaacgttggtgccggaggaaggtgtttatcgggaactgttacgctgttagccctaggatg
gttatcaggcgattcccggaagttagatccattgagctgaaagggaaaccacactttgct
gacttcaatctggtgccagacggttggggcggttacgttcttcagtggatcgcggaaatg
gctggcgcctatccttggcttggggagattcgacttaagcggatggtagttacggatgaa
agcttagagcttatcgctaagtcgtttaagaatttcaaagtgctggtgcttttttcttgt
gaagggttttcaactgatggacttgctgccattgctgctagttgcaagaatctgagagag
ctggacttgagggaaagtgaagtggatgatttgagtgggcattggcttgctcaatttcct
gagacatgcacgtccttagtgtcccttaacatttcttgcttaggatctgatgaagttagt
ttctctgccttggagcgcctggttgatagatgtcctaacctgaggtctcttcagctcaac
cgtgcagtgacccttgataagattgccaacattttacgccgtgctccacagttggttgat
tttggcaccggtaactatgcagctgagctacagcctgatgtcttctcaaacttggctgga
gctttttctagttgcaaggagctaaagagcttgtcagggttttgggatgtggtcccagct
tatcttccagctctttactctatctgccctagattaacatcgctgaacttgagctatgct
accatacaaagtcctgatctcatcaagcttgtaagccactgtccaaggttgcagcgcctt
ttgtttttaatccaggtacttgattatgttgaagatagtggccttgaagaacttgcttct
agttgtaaggacctacaggagttacgtgtgttcccatctgacccatttggtgtagagcca
aatgtatccttgacagaacagggccttgttgctgtttctttgggttgtcctaagctacag
tcagttctgtatttctgccgacggatgtctaatgcagcgttagtcaccattgcccagaat
tgtccgaacttgacccgttttcgtctatgtataattgagcctaaaacacctgattacctg
acccttgagccacttgatgctggttttggagccattgttgagcactgcaaggatctcagg
cggctttccttgtctggtctcctcacagatcatgtgtttgaatatattgggacatatggg
aaaaagctagagatgctgtccgtggcttttgcaggagatagtgatttaggactccatcac
gtgctttctggctgtgaaagcctccgtaaactagagattagggactgccctttcggagac
aaggctcttttggccaatgctgcaaagctggagacaatgcgatccctttggatgtcttct
tgcgccgtgagtttcggagcatgtaagctgctaggtcaaaagatgcccaagttgaatgtt
gaagttatagacgagacagaacctccagattcaagacctgaaagctacccagttgataag
ctgtacatatataggtctgtcgctgggccgagatttgacatgcctccttttgtgtggtca
atggatgaagcagtgaagattctgcattga
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