Gossypium raimondii: 105803085
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Entry
105803085 CDS
T04129
Name
(RefSeq) isoamylase 2, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
gra
Gossypium raimondii
Pathway
gra00500
Starch and sucrose metabolism
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
105803085
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
105803085
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
ISOA1-3_C
Isoamylase_C
Motif
Other DBs
NCBI-GeneID:
105803085
NCBI-ProteinID:
XP_012490521
UniProt:
A0A0D2P8F3
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Position
11:52219635..52223152
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AA seq
866 aa
AA seq
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MATLSPFHTIGSHCLNLGANELSKSAITSCVCKSKVGQSLQRIDVGRKLLPGEVVHNVAQ
SPRWSLDLRCFAAARVSVEQTEESVTKTSQVDELQKQSTYLFRTETGGQVKVFVCKRSVK
YVVDIEVSSLQLSSDDSQLKLSGGLYRSNHDIINQIIETPFIARSSSELALELEFEAKEV
PCYLSFLLKASSGASSSGSEIRSHRKSSFCVPIGLDQGYPAPLGLSFSTDGSMNFAVYSR
NAESLVLCLYDDNASEKPALELDLDPYVNRTGNIWHASIEGAWTFVSYGYRCKGNRDTFH
AEHVLLDPYAKIIGSSIPNHHESGLLPKHLGRLCKEPAFDWSGDLSPNIPLEQLLVYRLN
VMQFTKDKSSKLPADVAGTFSGVTEKVQHLKDLGINAVLLEPILTFSEQKGPYFPCHFFS
PANLYGPSNVSVSAINSMKGMVKNLHANGIEVFLEVVFTHTAEGGALQGLDDLSYYHNSV
EDLEARNALNCNYPVVQQFILDSLRHWVTEFHIDGFCFINASCLLRGVHGERLSRPPLVE
AIAFEPVLSMTKIIADCWDPYDKMPKEIRFPHWKKWAEMNTKFCSDIRNFLRGQGALSSL
ATRLCGSGDIFSDGRGPAFSFNFIARNFGLPLVDLVSYSNAELASEVSWNCGEEGPTINT
AVLERRLKQIRNFLFVLYISLGIPVLNMGDECGHSSSGSPSCGSRKHLDWNTMTTGFGIQ
TTKFISFLISLRKSRSDLLQKRNFLKEENIEWHGSNRSPPGWEDPSCKFLAMRLKADKAE
GQLSSEASQLKGDLFIAFNAADRAETIILPPPPDGMAWRQLVDTALPYPGFFSTDGKPIC
EQMMGLVAYKMKSRSCILFEACTDGS
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggctactctttctcctttccatacaatagggtcccattgcctaaacttgggagccaat
gaactgtctaaatcggctattaccagttgtgtttgtaaaagcaaagtgggacagagcctt
cagagaatagatgtaggaagaaagcttttacctggagaagttgtacataatgtcgctcaa
tctcctcgttggagtcttgatttgagatgctttgctgcagcacgagtttctgttgagcaa
actgaagaatcagtcactaaaactagccaagttgatgaacttcaaaagcaatcgacttat
ctctttcgaacagaaactggtggtcaggtcaaagtttttgtttgcaagagaagtgtcaaa
tatgtagtagatattgaagtttcatccctgcagttgtccagtgatgacagccagctgaag
ctaagtgggggcctgtacagatccaatcatgatataataaaccagatcattgaaacccca
tttatagcaaggtcttccagtgagttggcacttgagttggagtttgaagctaaagaagtc
ccatgctacttatcgttcttgctgaaagcttcatcaggtgcaagttcaagtggctcagaa
atcaggagtcataggaagtctagtttttgtgtaccgattggtttagatcaagggtatcca
gctccattgggtctttccttttcaacagatggttccatgaactttgcagtttattcaaga
aacgcagaaagtttggtcctgtgcttgtatgatgataatgcatcagaaaaacctgcttta
gagcttgaccttgatccttacgttaatcggactggtaatatttggcatgcttcaatagaa
ggtgcatggacttttgtgagctatggttatcggtgcaagggaaacagggacacattccat
gcagaacatgttcttttggatccttatgctaaaataattgggagttccattcctaatcat
catgagtctggtttgctcccgaaacaccttgggcgactatgcaaggagcctgcttttgac
tggagtggtgatctttctccaaacatacctttggaacaattactggtgtatcggttgaat
gttatgcaatttactaaagacaaatctagtaagctaccagctgatgtggcagggactttc
tcaggtgtaactgagaaagtacagcatttaaaagatctcggcattaatgctgtcttatta
gagccaatacttacattcagtgagcagaagggaccgtatttcccatgtcatttcttttca
ccagcaaacctgtatgggccttccaatgtttctgtatctgctatcaactcaatgaagggg
atggttaagaacttgcatgccaatgggatagaggtcttcctggaagtggtttttacccat
actgctgagggtggagccctgcaaggacttgatgatttatcctattatcacaatagtgtt
gaagatttagaagctagaaatgctttgaattgtaactatcccgttgttcaacagtttatt
ttagatagccttcggcattgggtgactgaattccacattgatggtttctgtttcatcaat
gcttcatgtctgttgagaggggttcatggtgaacgcttgtctcgtcctcctttggttgaa
gcaatagcttttgaaccagtgctgtccatgactaaaatcattgcagattgctgggatcca
tatgacaagatgccaaaggagatacgttttcctcattggaaaaaatgggcagaaatgaat
acaaagttttgttccgatataaggaactttttgagaggccaaggtgctctgagtagtctt
gctacacggctttgtgggagtggggacatattctctgatggccgaggcccagcattttca
ttcaattttattgctaggaattttggacttcctcttgtggacttggtcagctatagtaat
gctgagttagcttcagaagtaagttggaactgtggggaagaaggacctacaattaacact
gctgtgctcgaaagaaggctgaaacaaattcgtaattttctctttgttttgtacatttcg
ctgggcattcctgttcttaacatgggagatgaatgtggccactcttccagtggttccccg
tcatgtggtagcagaaaacatttagattggaataccatgacaacaggttttggtattcaa
acaacaaagtttatctcattcttgatttcgcttagaaagagccgaagtgacctccttcaa
aaaaggaactttctcaaagaagaaaacattgaatggcatggaagcaatcggtcaccgcca
ggatgggaagacccctcctgcaaattcctggctatgagattgaaagctgataaagcagag
ggccagttgagctctgaggcatctcaattaaagggtgacctgtttattgccttcaatgca
gctgatagagcggagaccattattctacccccacctccagatgggatggcatggcgtcaa
ttagtcgatacagctttaccttaccccggctttttctcaactgatggtaagcctatttgt
gagcaaatgatggggttagttgcttacaaaatgaagtctcgcagctgcattttgtttgaa
gcttgcactgatggtagttaa
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