Gossypium raimondii: 105803303
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Entry
105803303 CDS
T04129
Name
(RefSeq) nuclear pore complex protein NUP62
KO
K14306
nuclear pore complex protein Nup62
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105803303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105803303
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105803303
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
ATG17_like
COG3_N
DUF6306
SGT1
DUF1664
Motif
Other DBs
NCBI-GeneID:
105803303
NCBI-ProteinID:
XP_012490857
UniProt:
A0A0D2SE37
LinkDB
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Position
11:50203729..50210047
Genome browser
AA seq
788 aa
AA seq
DB search
MADNPFNPSGGFGTSSSLFGASSGSSPFSSSSATGPFSFASSSSSASTATTVTTPSFSGL
FSSSSASNSATTSPFGAAGFSFSVGSPFSSSSASSNTTAASTAAASTSSSTSGFSFAPSS
SFGFGNPASSSSPASVFSEKVGASSSPFGASSGSTLFSSSPAPATSSSFGSSSSSSAAAP
APAPSFSSFISSSSASNSTTTSPFSSSTGFPFLGGSSFGKSTESSTTTATFTTVPSLTAA
SSSSSSSGFSFSLPSSASQPTFGYGNAASSSSSSSAPTVPGTFGTSSSPFGASSGSPLFS
SSQAPATTTTTTAAMSSFGSLCSPSTATATTPSFPSLSSSSTASSTGFSFGGSSPFLKST
ASSTPTSTYTTAPSLAAASSSSSSSFSFASPSASQPAYGFGNAASSSTPAPTLSGSAVSK
PTSLSFGTSSAPLFSTVTTTTASTPAASTTTASTPAFPAFNLSSSSSSATASSAAPASSA
ATSAAVSSLTGFGVTNVAATSGSSGSFSGFSLSTKPSTPASSSQAQAIATAPVFSLTASG
SSASTTSTSISTSAQTSSALVVASSSGTSSSATAAVSTTPKLPSEITGKTVEEIIKEWNA
ELQERTGKFRKQASAIAEWDRRILQNRDVLLRLEIEVAKVVETQASLERQLELIETHQQE
VDKALQSMEEEAERIYKDERGLLLDDEAASTRDAMYEQAENVERELEHMTEQIKSIIETV
NSSQGGELEALDGMTPLDVVVKILNNQLTSLMWIDEKAEEFSGRIRKLAAQGNAADGELI
AAPKYWMS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggccgataatcccttcaatccttcgggagggtttgggacatcctcatccctatttgga
gccagcagtggttcttctccattttcatcttcatctgctactggcccctttagttttgca
tcttcgtcttcatcagcttctactgctactactgttacaactccatcgttttcaggcttg
ttttcgtcaagttcagcttcaaattcagccactacatcgcctttcggtgctgctgggttc
tctttctcagttggttcgccattttcttcaagcagcgctagttcgaatacaacagcagcc
tctactgcagcagcttctacttcttctagcacttcaggcttctcttttgctccatcttct
tcctttggatttggcaatccagcttcatcatcatccccggcatccgtattctctgaaaag
gtcggggcatcatcttccccgttcggtgccagcagtggttcaactttattttcatcttca
cctgcaccggctacttcaagttcttttggttcttcgtcttcatcttcagcggcagcccca
gccccagccccatctttttcaagcttcatatcttcgagctcagcttcaaattctaccacc
acttcacctttctcatcttctacagggttccccttcctgggtggttcatcttttggaaag
agcactgaaagttcgactacaacagcaacctttactacagtaccttccttaacagctgct
tcttcttcatcaagttcttcaggcttctctttttccctcccttcttcagcctctcaacct
acctttggttatggcaatgcagcttcatcttcgtcatcatcatcagcacccacagtccct
gggacatttgggacatcttcatccccatttggagccagtagtggttcccctctattttca
tcttcacaagcaccggctaccactactaccactactgctgctatgagctcttttggttct
ttatgttcaccttctactgctacagctactactccatcttttccaagcttatcatcatcg
agcacagcttcttctacgggattctcttttgggggtagttcaccatttttgaagagcact
gctagttcaacaccaacatccacctatactacagcaccttctttagcagctgcttcttca
tcaagctcttcaagcttctcatttgcctcgccttcagcttctcaacctgcatatggattt
ggcaatgcagcttcatcatcaacacctgcacccacattgtctggctctgctgtgtcaaaa
cccacttccttgtcttttggaacatcatcagcaccattgttttcgactgttactaccaca
actgcttctacccctgcagctagtactaccactgcttcaactccagcattcccggccttt
aacttaagttcttcgtcttcttctgctacagcttcatcagctgcacctgctagttcagct
gctacatcagctgctgtgagttctttgactggatttggtgtgacaaatgtagccgctaca
tctgggagttctggttctttctctggcttttctttatcaacaaaaccatccactcctgct
tcgtcctcacaagcacaagccattgccactgctcctgtattcagtctcactgcttctggt
tcttctgcttcaacaacttcaacttccattagtacttctgcccaaacatcatcggcactt
gttgtagcttcaagtagtgggacaagttcaagtgctactgctgcagtatctaccacccca
aaattaccttcggagataaccggaaagacagtggaggagatcatcaaggaatggaatgct
gaactgcaagaacgcactggaaaatttcgaaagcaggctagtgcaattgctgagtgggat
aggcgaatcttgcagaatcgtgatgttcttcttaggcttgagattgaagtggcaaaagtg
gttgagacccaagctagcttggagcgacaactggagttaattgagactcaccaacaagag
gttgataaggctttgcaaagtatggaagaagaagcagaacgaatttataaagatgagcgt
ggattgcttcttgatgatgaagctgcgtcaacaagagatgcaatgtatgagcaggcagaa
aatgtggagagggagctggagcatatgacggaacagatcaagtcgattattgagacagta
aactctagtcagggtggggaactcgaggcacttgacggaatgactcccctagatgtggtg
gtcaagatcttgaataatcaactaacttctttaatgtggatcgatgagaaggctgaggaa
ttctctggtcgtattcggaagcttgcagcccagggtaatgctgcagatggagaattaatt
gctgctccaaaatattggatgtcctga
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