Gossypium raimondii: 105803450 Help Entry 105803450         CDS       T04129                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism gra  Gossypium raimondii Pathway gra04120   Ubiquitin mediated proteolysis gra04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:gra00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     105803450  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     105803450  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:gra04121]     105803450 Enzymes [BR:gra01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      105803450 Ubiquitin system [BR:gra04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     105803450   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      105803450 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 zf-C3HC4_2 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_EML zf-C3HC4 Beta-prop_TEP1_C WD40_RFWD3 WD40_like Beta-prop_CAF1B_HIR1 zf-C3HC4_3 zf-RING_2 Beta-prop_WDR75_1st zf-C3HC4_4 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N U-box zf-RING_UBOX zf-RING_5 Beta-prop_SCAP DUF1664 YbfN Baculo_p24 zf-RING_10 Motif Other DBs NCBI-GeneID:  105803450 NCBI-ProteinID:  XP_012491109 LinkDB All DBs Position 11:complement(48280030..48289294) Genome browser AA seq 723 aa AA seqDB search MAWSVFTLRKENRSFGSLSLFLSKFYFILSRNFVYLSLHTSNPKTVTKNMEEFSTGTDPR VPAVKPDSKPSSLEEVPLEAASAAVSEDAEVDKDLLCPICMQIIKDAFLTSCGHSFCYMC IITHLRNKSDCPCCSQFLTNNQLFPNILLDKLLKKTSARQISKTASPVEQFRQALQQGYE VTIKELDNLLSLLAEKKRKMEQEEAERNMQILLDFLQCLRKQKVDELNEIQTDLQFIKED INSVERHRVDLYRARDRYSVKLRMLGDDSSTRKPWSSSMDKNNSGIVSSSLNIRGGMPAG NLQNKKIDGKTQLSGHVSQRKDALSGADSQGFNQSGLSVARKKRIHAQFNDLQECYLQKR RQLANQLHIKQESDKNVIHREGYNAGLADFQSVLSTFTQYSRLRVIAEVRLGDLFHSANI VSSIEFDRDDELFATAGVSRRIKVFDLSMVLNEPADVHCPVVEMSTRSKLSCLSWNKHWK NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTDPSMLVSGSDDCKVKVWCT KQEASVINIDMKANICCVKYNPGSSNFIAVGSADHHIHYYDLRNISSPLHVFSGHKKAVS YVKFLSENELASASTDSTLRLWDVKENLPLRTFKGHTNEKNFVGLTVNSEYIACGSETNE VYVYHKEISKPVTWHRFGSQEMEDADEDGGGSHFISAVCWKSDSPTMLTANSQGTIKVLV LAA NT seq 2172 nt NT seq  +upstreamnt  +downstreamnt atggcgtggtctgtttttaccctcagaaaggaaaaccgctcatttggttctctctctctc tttctctctaaattttattttattctaagcagaaattttgtttatttatcgctgcacacg tcaaatccaaaaacggtaactaaaaacatggaagaattctcaactggcaccgaccctcgt gtgccggcggtcaagccggactctaagccatcttccttggaggaagttccactcgaagct gcctccgctgctgtttcagaagatgccgaggtggataaggacttgctgtgtccgatttgt atgcagataattaaggacgccttcctcacgtcttgcggtcacagcttttgctacatgtgt ataattacccatcttcgaaacaagagcgattgcccttgttgctctcaatttctcactaat aatcagcttttccccaatattttgctcgataagcttttgaagaagacttcagctcgtcaa atatcaaaaactgcatcccctgtggaacagtttcgtcaggcgttacaacagggttatgag gttacaatcaaggagctggacaaccttttgtccctccttgcagagaagaagagaaaaatg gaacaggaagaagctgagagaaatatgcaaatactgctggatttcttacagtgcttaagg aagcaaaaagttgatgaactaaatgagatacaaactgatcttcagtttattaaagaggac ataaattctgtggagagacatagagtggatttgtatcgtgcaagagatagatactctgtg aaattgcggatgcttggagatgattctagcacaagaaagccatggtcttcatccatggac aagaacaatagtggaattgtctctagttctctaaatatcagaggagggatgcctgcaggg aatcttcaaaacaagaaaatagatggaaagacacagttgagtggccatgttagtcagaga aaagatgccttaagtggagcggactcacaagggttcaatcaatctggtctctctgttgca agaaaaaagcggattcatgcccagtttaatgacctacaagagtgttacctgcaaaagcga cgtcagttggcaaaccagctgcatattaagcaagaaagtgataaaaatgtcattcataga gagggttataatgcgggtcttgcagattttcagtctgtgctgagtacttttactcaatac agtcgactaagagtcattgctgaagtgaggcttggagatctctttcattcagccaatata gtatcaagcatagaatttgaccgtgatgatgagttgttcgctacagctggagtgtctcgg cgcattaaagtttttgatctctcaatggtcctaaatgaaccagcagatgtacactgtcct gttgtggagatgtccacgcgttctaaactaagttgcttgagttggaacaagcattggaag aatcatatagctagtagtgattatgaggggatagtaaccgtgtgggatgtaacaacacgt cagagtctaatggaatatgaagaacatgaaaaacgagcatggagtgttgatttctcacgg acggacccctcaatgcttgtatctggtagtgatgattgcaaggtgaaagtttggtgcaca aagcaggaggccagtgttattaatattgacatgaaagcaaatatatgttgtgtcaagtat aatcctggatctagcaatttcattgcggttggttcagcagatcatcacatccactattat gatttaagaaacatcagtagtccacttcatgtgttcagtgggcacaagaaagcggtctca tatgtgaaattcttgtctgaaaatgaacttgcttctgcatctacagatagcacactaagg ttatgggatgtgaaggagaatctgccgcttcgaacttttaaaggccatacaaatgagaag aatttcgtaggcctcactgtaaacagtgaatatattgcatgcggcagcgaaacaaatgaa gtgtacgtgtaccacaaggaaatatcgaaaccggtaacatggcatagatttggttcacaa gagatggaggatgcagatgaagatgggggtggatcgcacttcataagtgcggtgtgttgg aagagcgatagccctaccatgctaactgctaacagtcagggaaccataaaagtgctagtc cttgcggcttga

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