Gossypium raimondii: 105803506
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Entry
105803506 CDS
T04129
Name
(RefSeq) rRNA (cytosine-C(5))-methyltransferase NOP2C isoform X1
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gra03016
]
105803506
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
105803506
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
FtsJ
RsmF-B_ferredox
NSUN5_fdxn-like
Methyltransf_25
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
105803506
NCBI-ProteinID:
XP_012491182
UniProt:
A0A0D2TGS6
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Position
11:complement(47413192..47422201)
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AA seq
618 aa
AA seq
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MKKKGRNLLAAFRQTFLTLQNMTPQAEAEAEIQLNAASARYSYNPILRWNPQVEDYFIKA
YGSLHFAQISKALTRPSCYSCIRVNTLKSTSDAVIEKLQEIMRKSGSQNDVVGINLKENK
ASNDIDLDMVEKQSSLQNESITKCQIPGLEYVVFVKGSGPHEIDYDYLPDKPPKEVLVSR
KCAEAVLRGAQVYVPGIMACSSHVEEGDVVAVSVAVEQPFPDGGWGLGITRGTVLQGLPT
DPYHFERNGLYIGQGTTMLSRAGIFRASQGIAVDMNNRVFKLPSFYDVLEGEIFLQNLPS
IIAAHALDPQKGERILDMCAAPGGKTTAIAILMKDEGEVIAADRSHNKVIDIQKLAAELG
LTCITTYKLDALKAVRKRNGSSDMTTLCCNKDNNDVVNQRSDSGPLGNGVSSTTIVGSNA
DTTFKENVSNEKANERTYTSKADIRKNTRRMRNGPGRNQSLGGRVENSKGFLPNSFDRVL
LDAPCSALGLRPRLFAGEETIESLRNHGKYQRRMFDQAVQLVRPGGVLVYSTCTINPGEN
EALVRYALDTYKFLSLAPQHPRIGGAGLVGRCEFPDGYVEEWLRPGEEELVQRFDPSSQL
DTIGFFIAKFAVGPKDNI
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaaagggagaaatttacttgcagctttccgtcaaacctttctcaccctccaa
aacatgactccccaggctgaagccgaggctgagatacagctgaatgcagcatcagcgcgt
tacagttacaaccccatattgcgatggaaccctcaagtcgaagattacttcatcaaagca
tacgggtctctccattttgctcaaatctctaaagccttaacgcggccgtcttgctattct
tgtattcgggtgaacactctcaagtcaacaagtgatgctgtcattgagaaacttcaggaa
atcatgagaaaatcggggtctcaaaatgatgttgtaggcataaatttgaaggagaataaa
gcaagtaatgatattgacttggatatggttgagaagcaatcgagcttacaaaatgagtcc
atcactaagtgtcagatacccggtttagaatacgttgtatttgttaagggttctggacca
catgaaattgactatgattatttgcccgacaaaccacctaaggaggtgcttgttagtagg
aaatgtgctgaagcagttcttcgaggtgctcaggtatatgttccaggtataatggcctgc
agttctcatgttgaggaaggggatgtagttgcagtttcagttgctgtggagcagcctttt
cctgacggtggatggggacttggtataacacgtgggactgttctgcagggactgccaacc
gatccctatcactttgagcgaaatggattatacattggtcaaggaacaacaatgttgtca
agagccgggatcttccgtgcttctcaaggaattgctgttgatatgaataatcgagtattt
aagttgccttcattttatgatgttcttgaaggggaaatatttcttcaaaacctgccgagc
attattgctgctcatgctcttgatcctcagaaaggtgagcggatactagacatgtgtgca
gctccaggagggaagacaactgcaattgctatacttatgaaggatgaaggggaggtgatt
gcagctgatagatcccataataaggtgattgatattcagaaattggcagctgagttgggt
ttgacttgtataacaacatataaactagatgctctcaaagctgttcgtaaaagaaatggt
tcaagtgatatgaccactctgtgctgtaacaaggataacaatgatgttgtgaatcaaagg
tctgactcggggcctcttggcaatggagtgtcatctactaccattgtaggatcaaatgct
gatacaactttcaaggagaatgttagcaatgaaaaagcaaatgagagaacttacaccagc
aaagctgacattaggaagaacacgcgaagaatgaggaatggcccagggagaaatcaaagc
ctgggtggtagagttgagaattcaaaaggcttccttcctaacagctttgatcgtgtcctt
cttgacgctccttgttccgctcttggtttgagacctcggctatttgctggagaggaaacc
atagagtcattgagaaatcatggtaagtatcaaaggaggatgtttgatcaggctgttcag
ctagttcgccctggtggagtccttgtgtactcaacatgtacaatcaatcctggtgagaat
gaagcattggtccgatatgctttggacacatacaagttcctgtctttagctccacagcat
ccaagaattggaggagctggtcttgtcggtcgttgtgaatttccagatggatatgttgaa
gaatggctaagaccaggagaggaggaattggttcagaggtttgatccctcatctcaactt
gatactattggatttttcatagccaaatttgctgtaggccccaaagacaacatataa
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