Gossypium raimondii: 105803547
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Entry
105803547 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Pathway
gra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105803547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105803547
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105803547
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
105803547
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_6
zf-RING_UBOX
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
105803547
NCBI-ProteinID:
XP_012491241
UniProt:
A0A0D2QUV9
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Position
11:46976950..46980037
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AA seq
344 aa
AA seq
DB search
MAKFSVGIDEDGEGPSNRVPKRQRAERVLDIEGSGQEESEQEEEDEESEGEEASEGEEEA
SEESEGEEELEESGAEQGAMSPQASRDGSISITLTDPEVLDCSICYEALTIPVFQCENGH
IACSTCCIKMRNRCPSCMTPIGYSRCRAIEKVLESVKVTCQNTKYGCKEAFSYSMKQKHG
KACLFAPCSCPLPDCDFEGSSEELSAHFGNVHKYSATRFLYDRLAPITLGVSEKFLILRE
ETDGSLFILHNKVENLGNVVTLSRIGPSTERGFFYELTVKAPSDVSNLRLQSLTKSTPKR
VDSPQSLGFLLVPSQFSCISRQIKMDLRLGRSDRFSYYQRPGGA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttctctgtggggatcgacgaagacggagaagggccaagcaatcgagtccct
aagcgtcaaagggcggagcgtgttcttgatatcgaaggctctggtcaagaagaatccgag
caagaggaagaagacgaagaatctgaaggcgaagaagcatccgaaggagaagaagaagct
tccgaagaatctgaaggagaagaagaattggaggaaagtggagctgagcaaggagcaatg
agccctcaggcttctcgagatggatccatttctatcacgttaactgaccctgaagttctt
gattgttctatctgttatgaggccttgactatccctgtttttcagtgtgagaatgggcat
atagcttgctctacctgttgcatcaaaatgaggaatagatgtccatcctgtatgactcca
atcggctatagtcgctgcagggcgattgagaaggtgttggaatctgtcaaagtgacatgc
caaaacacaaagtacgggtgcaaagaagcattcagttatagcatgaagcagaaacatgga
aaggcatgccttttcgctccatgttcatgcccccttcctgattgcgactttgagggttca
tcagaggagttaagtgcacactttggcaatgtacacaagtattctgcaacacgtttcctt
tatgatcgtctagcacccattaccttaggagtttctgagaagttccttattcttcgagag
gagacagatggttctttgttcattcttcacaacaaggttgagaatttggggaatgtagtt
actttgagccggattgggccctcaacggagagaggtttcttctatgaactaactgtgaaa
gctccatctgatgtaagtaatcttagattacagtccctcacaaagagcactccgaaacga
gttgatagcccacagtcattagggtttctcctggttccaagtcagttctcatgcatttcg
cggcagatcaagatggacctccgcctggggcgttctgatcggttttcctactaccagaga
cctggtggtgcataa
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