Gossypium raimondii: 105803579
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Entry
105803579 CDS
T04129
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105803579
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
105803579
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
105803579
NCBI-ProteinID:
XP_012491283
UniProt:
A0A0D2SFP0
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Position
11:46379419..46387423
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AA seq
714 aa
AA seq
DB search
MDGRKRNFFRKQMNTPFKRKGVNNNNSNNNNNNNNNNRKLKLGVNSAPEQFSGNLNPGDT
VYRILCPSRKIGGVIGKGGNIVKALRQETRAKITVGDSVLGCDERVVVIYSSPSKVKEHN
SDEDYGGDNEKEVPMEPCCAAQDALLKVHDRIVEEDLFGGIVSDDDNGNAVVTARLLVPN
NMVGCLLGRGGDVIQRLRSGTGATIRVLPADHLPACAVATDELVQISGKRDVTKRALYEV
STLLHQNPRKDKPPLSFSVPHSSQNFPPSALPPSNSMWSHRNFSPHDSPPMPWMSAHRNR
LSGIGPGSFSSIPPAGGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVE
DASTESDERVICVSGIEALGNPRSHTIDAILQLQNKTSESSEKGTITTRLLVPSSKVGCI
LGQGGHVINEMRRRTQADIRVCSKDDKPKCAYEDEELVQISGNFGVTKDALAEIASRLRV
RTLRDVNAGAEPASVGSVRVSGPARNMPDGPPPAATIGPGYSGGIESFRGGGAHVYDYEP
QNFSVPPAAARNSNMNSAVEAKVPETVSSSAVGIRGSTVFSSSEVSRAILKLDDPQTGDF
EEFRGSSEHTSAQSIFQSFMASSGQSMNAQQDSYPNTNIHQSSYQKMSAQYSPYQNVSAQ
QNYSNRQAHQGPYHNLTVQQSPYPLNSQQGPYANFNAPPSAYHNYSAQPGSNPY
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggatgggaggaagaggaatttctttaggaaacagatgaatacgccctttaagagaaaa
ggggttaataataataatagtaataataataataataataataataataataggaaacta
aaactgggtgttaattctgcccctgaacagttttccggaaatttgaatcctggagacact
gtttaccgtatactttgtccttcgagaaaaattggtggtgttattgggaagggtgggaat
atagtaaaagcattaaggcaggagactcgggctaagattacggttggtgattctgtcctt
ggttgtgatgagagagttgttgttatttatagttctccgtccaaggtgaaagaacataat
tcagatgaggattatggtggtgataatgaaaaagaggtacccatggagccttgctgtgct
gcacaggatgctttgttgaaagttcacgataggattgttgaggaagatctttttggtggg
atagtgtctgatgatgataatgggaatgctgttgtcactgcacggcttcttgttccaaat
aatatggtaggatgtctcttagggagagggggtgatgtgattcaaagattgcgaagtggc
acaggtgctactatacgtgttcttccagctgatcatcttcctgcttgtgcagtggcaaca
gatgaattagtgcagatatcaggaaaacgagatgtcacaaagagagctctatatgaagtt
tccactcttttgcatcaaaatccacggaaagacaagcctcctttgagcttctctgtgcca
cattcaagccagaatttccctcctagtgctcttccaccgagcaattcaatgtggtcccat
cgaaatttttctcctcatgatagtccaccaatgccatggatgagtgctcatagaaaccgg
ctatctggaattgggccaggtagcttcagcagtattcctccagcaggtggtgctgaagct
tcagctgagttttcaatgaaaattttgtgcccagctgggaagattggtggtgtaattggc
aagggtggctttaatgttaaacagttacagcaggaaacaggagcaggcattcatgttgaa
gatgcatcaacggagtcagatgagcgagtaatttgtgtctctggaattgaggctcttggg
aaccctcgatcgcatacaatagatgctattctacagcttcagaataaaactagtgaatca
tctgagaaaggtacaattactactaggttgcttgttccatcaagcaaggttgggtgcatt
cttgggcaaggaggtcatgtaatcaatgagatgaggaggagaacccaggcagatattcgt
gtatgctcaaaggatgataagcctaagtgtgcatatgaagatgaagagctagtacagata
tctggcaattttggtgtcactaaggatgctttggctgagattgcttcgagacttagagta
agaacattgcgagatgtgaatgctggagcagaacctgcttctgttgggtctgtccgtgta
tccggtcctgcaagaaacatgcctgatggtccaccaccagctgctacaattgggccaggc
tactctggtggaattgaatctttcaggggtggtggtgcacatgtgtatgactatgaacct
cagaatttttctgttcctccagctgctgctagaaactcaaatatgaacagtgctgttgaa
gctaaagttccggaaactgtgtcaagttctgcagtaggcatcagaggaagtactgttttt
agtagtagtgaggtttcaagggcaatcctaaagcttgatgatcctcaaactggtgacttt
gaagagttccgtggatcttctgagcatacaagtgctcagagcatttttcagtcgttcatg
gcttcttctggacaaagcatgaatgcacaacaggattcatatccaaatacgaacatccac
caaagttcctatcagaaaatgagtgctcaatatagcccctatcaaaatgtgagtgctcaa
cagaactattcaaacaggcaagctcatcaaggcccatatcataatttgactgtgcagcaa
agcccctatccactaaattctcagcaagggccttacgccaacttcaatgctccaccaagt
gcttaccacaattacagtgcacagccaggctctaacccgtattag
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