Gossypium raimondii: 105803589
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Entry
105803589 CDS
T04129
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105803589
Spliceosome [BR:
gra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105803589
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
DUF3658
DASH_Spc34
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
105803589
NCBI-ProteinID:
XP_052480123
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Position
11:complement(46218667..46224852)
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AA seq
734 aa
AA seq
DB search
MFTTLLKSPIPFSSSFNSTQNPSKTQKGNHSFNKNSKFSVSKTHRNGPIKMPTPPWMKGP
LLLQPDEVLKPTTKRSSNNNSKAPEKALFGKESGVRGKKVMKKIIRDVEKLQGNGVLDDN
QIGKFEEFEIGNWLEEIGSDGEVKKFDRKMPWVREEEKVVFRRMKKEKVLTQAEIILDND
LLERLRKKAMRMRKWVKVMKAGVTQAVVDEIRLVWRNNELVMLKFGVPLCRNMDRASEIV
EMKTGGLVVWCKKDVLVVYRGQNHWLTSNGRRVFNNLASDNNTTMSQEKSNASTWGRSLN
GEDRDENNQPVVGSLYERETDRLLDGLGPRFIDWWMRKPLPVDADLLPEVVPGFRPPTRL
SPPKTRPKLTDEELTNLRKLAHPLPFHFALGRNRNLQGLANAILKLWEKSLIAKIAIKWG
AQNTDNEQMANELKDLTGGVLLLRNKFLIIFYRGKDFLPQGVANSVMEREMALRRCQLIE
EDARVKVAETFQVANEPLAKTSTVGTLAEFQDIQTKYGVLEKENNELEIQIEAQKENLER
ELRNQERKLAILNGKIEKSATKLAKLNSSWQTAEPDLDLETITEEERECLRKIGLKLSSC
LFLGRRGVFNGVIEGVHQHWKHREVVKVITMQRAFLRVIYTAKMLVAESGGILVSVEKLK
EGHAIIIYRGKNYRRPSKLMTDHLLTKREALQRSIELQRIGSLKFFAYQRRQAILDLKLK
LAKLEEQGVASPQG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccactctcttaaaatctcccattcctttctcttcttccttcaactcaacccaa
aacccttccaaaacccagaaaggaaatcactctttcaacaaaaattccaaattctcagtc
tcaaaaacccacaggaatggccccattaagatgccaacacctccatggatgaagggtcct
ctccttctccaacccgatgaagtgttaaaacccactactaaaaggagctcaaacaacaat
tcaaaggcacctgaaaaggcattgtttggaaaggaaagcggggtgagagggaagaaagtg
atgaaaaagatcatcagagacgtggaaaagctacaagggaatggagttttagacgataac
cagattgggaaatttgaagaatttgagatcgggaattggttggaggagattggaagtgat
ggggaagtgaaaaaatttgataggaaaatgccgtgggtgagagaagaagagaaagttgtg
tttaggaggatgaaaaaggagaaagttttgacacaggctgagattattcttgataacgat
ttgcttgagagactgagaaaaaaggctatgaggatgaggaaatgggttaaggtgatgaaa
gctggtgtaactcaggctgttgttgatgagataaggttggtttggaggaacaatgagctt
gttatgcttaaatttggtgttcctttgtgtagaaatatggatagagcaagtgaaattgtt
gagatgaagactgggggcttggttgtatggtgcaagaaagatgttcttgttgtttataga
ggacagaaccactggctgacttcaaatggtcgaagagtattcaataacttggcctcagac
aataatactactatgtctcaagaaaaatctaatgcaagtacttgggggagaagtttgaat
ggagaagacagagatgagaataatcaaccagtagttggatcactgtatgagagggaaact
gatagattattggatggtttaggacctcgctttattgactggtggatgcgaaagccatta
ccagttgatgctgacttgcttccagaagtggttcctggctttaggcctccaacaagactt
tctcctcctaaaactagaccaaaattgacagatgaggagttgacaaatttgaggaagctc
gctcatcctttaccttttcactttgctcttgggaggaataggaaccttcaaggcttggct
aatgctatcttgaaattatgggaaaagagtctcatagcaaagattgctataaagtggggg
gcacaaaatactgacaatgagcaaatggctaatgagctcaaggatctcacggggggagtt
ttgttactaaggaataagttccttataatattctaccgggggaaggacttccttcctcaa
ggtgttgctaattctgtaatggagagagaaatggcactcaggagatgccaacttattgaa
gaagatgctcgagtcaaagtagctgaaacctttcaggttgctaatgaacctttggcgaag
actagcactgtaggaactttagcagaatttcaggatattcagaccaaatatggagtcctg
gaaaaagaaaataatgaactcgaaattcaaatagaagctcaaaaggaaaacttagagagg
gaattgagaaaccaagaacgcaaacttgcaattctcaatggaaagatagagaagtcggct
acaaagctagcaaagttgaattcttcatggcaaactgctgagccagatttggatctcgaa
accattactgaagaggagagagaatgcttgcggaagatcggactgaagctaagtagttgc
ttatttcttggtaggcgtggggtctttaatggcgtcatagaaggagtacatcaacactgg
aagcacagagaagttgtcaaggtaatcacaatgcagagagcgttcctacgagttatctat
actgcaaaaatgctagtagcggagagtggtgggattttggtttcagtggagaagctaaaa
gaaggtcatgccataatcatctaccgaggaaaaaactatcgacgcccttcgaagctaatg
actgatcatctcctaactaagagggaagcattacaaaggtctattgaattacagagaatc
ggatcattgaagttttttgcatatcagcgacgacaggcaatcttagatttgaaactcaaa
ctggccaagttggaggaacaaggagttgctagtccacaagggtga
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