Gossypium raimondii: 105803599
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Entry
105803599 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105803599 isoform X2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105803599
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
105803599
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
ORC6_2nd
Zn_Ribbon_TF
HD_4
BRF2-like_C_cyclin_rpt
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
105803599
NCBI-ProteinID:
XP_012491311
UniProt:
A0A0D2PBE0
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Position
11:46162563..46171982
Genome browser
AA seq
597 aa
AA seq
DB search
MVYCNNCSRNVTGERVDDGLLSCTFCGKVLEDCIFATEPQFVKDSSGQSKLSGNFVKSTQ
SISDSRQHTIAKALDGIRSLKTGLLIDEYSDDVANVALRFYEVGLERNFTKGRRSELVQA
ACLYLACRQKGKPFLLIDFSHYLHVNVYELGSVYLQLCYVLYLADSKDLPKLIDPSIFIH
KFTNALIPEGNDEVVKTARDILASMKRDWMQTGRKPSGLCGAALYISALSHGLKFSKSKI
IEVVHICEATLSKRLIEFENTNSGALTMEEFTEKERELRTSSLTEKQPNIGSKETSLDEV
LCRHVGRKPFAYGLCNECYEEFMKVSGGIDGGSDPPAFQRAEKERMAKLSIEENNKSISS
STFASGSEIPENSGFLEDATNKAAIREGDNDKLPGVDDSDDGSDNFSDIDDIEVDGYLHN
EEEKHFKKIIWEEMNREYVEEQAAKEAAAAAAKEACMANYDKCPEDLQAAQKLAADVAEL
VAKSRKERQQKRAAEEKDAGPAQTAAEATRRMLVRKRLSSKINYDALEKLFDDPVTEKPK
KQRIESNSDEKEEKASKIGKEGDLEDEYNDNDDDGYGGIFYGDTEYEYEDNYDYDGY
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtttactgtaataattgctccagaaacgttactggagaacgcgtcgacgacggtctt
ttgtcttgcactttttgcgggaaggtgttggaagattgcatttttgcaaccgaacctcaa
ttcgttaaagattcatctggccaaagcaaactatctggaaattttgtgaaatctacgcaa
agtatttcagattcacgccagcataccatagctaaagctcttgatggtatcagatctttg
aagactggattgcttattgacgagtatagtgatgatgttgctaatgttgctttacggttt
tatgaagttggccttgaacggaatttcactaagggacgcagatcagagctagtacaggct
gcatgtctttatcttgcctgtcggcaaaagggaaagccattccttcttattgatttttca
cattatttacatgtaaatgtttatgagcttggctctgtatatctgcaactttgctatgtg
ctgtaccttgctgactcaaaggatcttccgaaactaattgatccttcaatttttattcat
aaatttacaaatgctttgattccagaaggaaatgatgaagttgttaaaactgcacgggac
attttagctagcatgaaacgggactggatgcagacagggcggaaacccagtggattatgt
ggtgcagcactgtacatttctgcactttcacatggtctgaagttttctaagtcaaagatt
atagaggttgttcacatttgtgaagcaacattgtcaaagcggttgattgaatttgagaat
accaactctggagccttaacgatggaggaatttacggaaaaggagagggagcttcgaact
agttcattaactgaaaaacagccaaatattgggtcaaaagaaaccagcttagatgaagtg
ctatgtaggcatgtggggagaaaaccttttgcctatggactttgtaatgaatgttatgaa
gagttcatgaaggtttcaggagggattgatggagggtcagatccacctgcattccaacgg
gctgagaaagagagaatggcaaaattatctattgaggaaaataataaaagcatatctagc
agcacgtttgcaagtggatctgaaatacctgaaaatagtgggtttttagaggatgcaact
aacaaggcagccattcgtgagggtgacaatgataagttacctggagttgatgatagtgat
gatggatcggataacttttctgatattgatgatattgaggttgatggttaccttcacaat
gaggaggagaagcatttcaaaaagatcatttgggaagaaatgaaccgggaatatgttgag
gaacaagcagccaaggaagcagctgcagcagcagctaaggaggcttgcatggccaactat
gataaatgcccagaggatctccaagctgcacagaagcttgctgcagatgttgcagaacta
gtggcaaaatctagaaaggagaggcaacaaaagcgagctgctgaagaaaaagatgcaggt
cctgctcagactgctgccgaggcaacccggcgaatgctggttaggaagagattaagttca
aaaataaactatgatgcattggagaagctctttgatgacccggttacagagaaacccaag
aaacaaagaatagaatcaaattcagatgaaaaggaggagaaggcttctaaaattggcaaa
gaaggtgatttagaagatgaatataacgacaatgatgatgatggatatggaggaattttt
tacggtgacactgaatatgagtatgaggataattatgattacgatggatattga
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