Gossypium raimondii: 105803710
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Entry
105803710 CDS
T04129
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gra03400
]
105803710
Enzymes [BR:
gra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
105803710
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
105803710
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
105803710
NCBI-ProteinID:
XP_012491543
UniProt:
A0A0D2TI04
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Position
11:44380331..44383810
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AA seq
639 aa
AA seq
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MKIVTYNVNGLRQRVSQFGSLLKLLNSFDADIICIQETKLRRQELSADLAIADGYESFFS
CTRTSDKGRTGYSGVATFCRVKSAFSSVEAALPIAAEEGFTGLLGCSRKDEAASAVAEGL
VEFSREELLKVDSEGRCIITDHGHFVLFNLYGPRAGDGDSERIQFKLNFFKILEKRWESL
LCRGRRIFVVGDLNIAPSAIDRCEAGPDFEKNEFRTWFRSMLVESGGHFFDVFRAKNPNR
REAFTCWPSNTGAEQFNYGTRIDHILCAGPCLHEEHDVEGHNLVTCHVKECAILTEYKRW
KPGSATRWKGGWNIKLEGSDHAPVYTCLREIPYVSEHSTPSLAARYLPMVHGLQQTLVSV
LMRRQATKQVKSDVVSSSFPDESIISGGCSHVKRSIANCDVNGTDISCRSLDQDSRNPIL
KVVGHSEDFKEEAACSTTIVFNEEYARPLPNKRTRKRARKSQQLSLRSFFQKSHNLDDGI
ENSTNDISTSQTGVLNSNNQSQEAPVMDDHRCGTMQNDTNGISSSQGQEEPDRPCSPTQN
NTNGNASSQGQEEQDGSRYLEKQKKSDALLEWQRIQQLMQNSIPLCKGHREPCVSRVVKK
PGPNFGHRFYVCARAEGPSSNPEANCGYFRWASTKSRPK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtaacttacaacgtaaatggactgaggcaaagagtctcacagttcggttct
ctccttaaattactcaattcctttgatgctgatattatctgcatccaggagacgaaattg
agaagacaagaattatcggcggatttggcaatagccgatggctatgaatccttcttttcc
tgcactcgtacctccgacaaaggccgaactggttactccggtgtggcaacattttgtcgt
gttaagtcggcgttctccagtgtagaagcggcgttgccgattgcggcggaggaaggcttc
acgggtctcctaggttgttctagaaaagacgaagcagcttcagcagtagctgaagggctt
gtggagttttcaagagaggagcttctcaaagttgatagtgaggggcggtgcattatcaca
gatcatggtcatttcgttcttttcaacttgtatggaccccgagcaggggacggtgattct
gagagaatacagttcaagctcaactttttcaagatattagagaaaagatgggagtctctg
ttgtgtcgaggaaggaggatttttgttgttggtgacctcaacattgctccttctgctatt
gatcgttgtgaagctggaccagattttgagaagaatgagtttagaacatggtttagatca
atgctagtggaatctggaggccatttctttgatgttttcagggcaaaaaatccaaacaga
agagaagcatttacatgctggccttcaaatactggtgctgagcaattcaattatgggaca
agaattgatcatattctatgtgctgggccttgcttacatgaggagcacgatgtagaggga
cataatttggtaacctgccatgtgaaggagtgtgccatcttgacagaatacaagcggtgg
aagcctggaagtgcaacaaggtggaaaggagggtggaacattaagttagaaggttcggac
catgcacctgtttatacgtgcttaagggaaatcccttatgtctcagaacatagcactcca
tctttagctgctagatatctgccaatggttcatggtctgcagcaaactcttgtgtcagtt
ttaatgagaaggcaagctactaagcaagtcaaatccgatgtagtatcaagttcatttcct
gatgaaagtatcatctcaggaggttgcagtcatgtaaaaaggtctatagctaattgtgat
gttaatggaaccgatatatcctgccgttctttggaccaggactcccgaaaccccatccta
aaagttgttggtcattctgaagatttcaaagaggaggctgcttgtagcactaccattgta
ttcaacgaggagtacgccaggccattgcctaacaaacgaaccaggaaaagagctagaaag
agtcaacagctctccttgagatcatttttccagaaaagtcacaacctagatgatggcatc
gagaattctacaaatgatatttcaactagccagaccggtgtcctaaactctaacaatcag
tcccaggaagctcctgtgatggatgatcatagatgcggtaccatgcagaatgatacaaat
ggaatttcatcctcacagggtcaagaagaaccagatcgtccatgtagtccaacacaaaac
aacacaaatgggaatgcatcctcacagggtcaagaagaacaagatggtagtcgttatttg
gagaaacagaagaagagtgatgcattattggagtggcaaaggatccaacaactcatgcaa
aacagcatacctctttgtaagggccatagagaaccttgtgtttctcgagtagtgaagaaa
ccaggtcctaattttggtcataggttctatgtgtgcgctcgagctgagggtccttcttcc
aaccctgaagcaaattgtggttacttcagatgggcttctacgaagtcacggccaaaatga
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