Gossypium raimondii: 105803799
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Entry
105803799 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105803799 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
gra
Gossypium raimondii
Pathway
gra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105803799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105803799
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105803799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
105803799
NCBI-ProteinID:
XP_012491651
LinkDB
All DBs
Position
11:complement(42768599..42775631)
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AA seq
1053 aa
AA seq
DB search
METETCIDSMDFKVQELLKEARLECSSLLTKLVDDTVSAIKSAIDKIPEGLQVTADWARG
FVRDIGADKAEFKFKKPKSIEIGGSYSIGCIAKPDVNIDLLLRLPKECFHEKDYLNYRYH
AKRCLYLCVIKKHLKSSSSIQKVEWSALQNEARKPVLVVYPAANLGEVPGLFIRIIPTAT
SLFDLSKLNMKRNNVRALNAGDDPQPTPIYNCSILEDMYLEEKSNFIKKTFSGWKELGEA
LILLKVWARLRSSIYVHDCLNGFLISIIVSYLVAKNKINRDMMPMGIFRATLKFIETHPL
WKHGLYFPMSDQNVSSKGNEQLNSLTRFNLAFRISSVAYPELQDEVALTLRCLEKCRDGG
CEEIFTTKIDNAAKYDYCIRLNLKGNSEVYSLGFCLDEECWRVYEQDVHSLLNQGLTDRA
KFIRVIWRNTYSDFNVENGLSALDSEPLFVGISVSSVEKAFRVVDIGPNAEKKDEALMFR
KFWGEKAELRRFQDGKIAESTVWESKQGTRHLILKRIIEFLLGRHLSLSKKDIVPVVDQL
DFCLLHDGKDPVSHSAKLLGTFEELSKRLRSIEDVPLKISSVQPLDSAFRFTSVFPPEPH
PLASKKVDVARLHNLTPFCVQSLEVMIQLEGSGNWPMDDVLIEKTKSVFLLKIAESLQDN
WGITCTATEEDVDVFMDGYAFRLRILHERGLSLVNKEIGGDQMKRVSSADKMLFVRSQHA
SMINGLQFRYPIFGPVVRIAKRWLASHLFSACLAEEAAELLVAYLFLKPLPFNVPCSRIT
GFLRFLRLLAEHDWAFSPLVVDINGDLSQNDEKEIDDNFTQSRKAYEENTQNESKAMFLA
TAYDKASEAWTRCSPNPLELKRLAAYARSSASLLTKLILQNQTDSRGWEVHYTCLLRTPL
SLYDAVILLHGDRLPYPKRLLFTSELDQGIFLGGKGRHVAHGNASTCFHPFLLPSDMKGS
SLEQLKTKLMVNFDPLRCFVGDVEKGFSNRLKLWYDSLGGDAIGLTWERSKKREREEEET
DRKYPVDLLRNIGELGKGFVRDVYLLKAPRLSS
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggagactgaaacttgcattgactctatggacttcaaagttcaagagttattaaaggag
gctcgtctcgaatgttcgtctctacttaccaagctcgtcgacgacaccgtttccgccatc
aaatccgccatagataaaattcctgaaggccttcaggttaccgcggattgggctcgaggt
tttgtgagagatattggtgcagacaaagccgaatttaaatttaagaagccgaagtctatt
gaaattggtggtagttattcaataggctgcatagcaaaaccagatgttaatattgatctt
ctcctccgcttaccaaaggaatgtttccacgagaaagactacctaaattaccggtatcat
gctaaaaggtgcctttacctctgtgttataaagaagcacttgaaatcctcttcatcaatt
cagaaggttgaatggtctgctttgcaaaacgaggctaggaaacctgtattggttgtctat
ccagctgcaaaccttggtgaagttcctgggctttttataagaataattcccacagcaaca
tccctatttgatctttccaagttgaacatgaagcggaacaatgtacgagctctgaatgca
ggggatgatcctcagcctacaccaatatataattgtagcatattggaagacatgtattta
gaggagaagtcaaattttattaagaaaacattttctggatggaaggaattgggagaggcc
ttaatcttgctgaaggtctgggctcggttgagaagttcgatatatgttcatgattgctta
aatgggtttctaatatctattatagtgtcgtaccttgtggccaaaaataagattaaccgt
gatatgatgccaatggggatatttcgtgccacattgaaatttattgaaactcatccattg
tggaagcatgggctttactttccaatgtcagaccagaatgtttcttctaagggaaatgag
cagcttaattctttaacccgcttcaatttggcattcagaatatcaagtgttgcttatcct
gagctacaagatgaagttgcgttaacacttaggtgtttagaaaaatgcagagatggtgga
tgtgaggaaattttcacaaccaagatcgacaatgctgctaaatacgattattgcattaga
ttgaacttgaaaggaaatagtgaggtttattctctgggattttgcttggatgaggaatgt
tggagagtgtatgagcaggatgtacacagtctgcttaatcaaggattgactgatagagca
aagtttattcgtgttatttggaggaacacttattcggactttaatgttgaaaatggctta
tcagcacttgatagtgagccattatttgttggaatttcagtgagctctgtagagaaggct
tttagggttgtagatattggcccaaatgctgaaaagaaagacgaggctctcatgtttcga
aaattttggggtgagaaggctgagcttcggagatttcaagatggtaaaattgcagaaagc
acagtatgggagagcaagcaggggacaagacatctcattttaaaaagaattattgagttt
ttactgggacgccatctttctttatcgaaaaaggatattgtcccagtagtggatcagctt
gatttctgtttgctacatgatggtaaagacccggtatcacattctgcaaaactgcttgga
acttttgaagaattgtctaaacgattgcgttctattgaagatgttcccttgaagatatct
agtgtgcagcctcttgattctgctttcaggtttacttctgtatttcctcctgaacctcat
cctctggcaagtaaaaaggtggatgtggcaaggttacataatttgaccccattctgtgtt
cagtcacttgaagttatgattcagttggaaggttctgggaattggccaatggatgatgtc
ttaattgagaaaactaaatcagttttccttctgaaaattgcagaaagtcttcaggataac
tgggggataacatgtactgctactgaggaagatgtggatgttttcatggatggatatgca
tttcgtcttagaattttgcatgagagaggcctaagcctggtgaataaagaaattggaggt
gaccaaatgaagcgggtttcatctgctgataaaatgctttttgttcgtagtcaacatgca
agcatgataaatggattacagtttcgttacccgatatttgggccggttgttaggattgca
aaacggtggcttgcttcacatctcttttcagcttgcttggcagaagaggctgctgagcta
ttagttgcctacctctttttgaagcctctaccatttaatgttccctgttcgcggatcact
ggatttttaaggttcttgcgactactagctgaacatgattgggctttttctccattggtt
gttgatataaatggtgatctgagccaaaatgatgagaaagagattgatgataactttaca
caaagtagaaaagcttacgaagaaaacacccaaaacgaaagcaaggccatgttcctggct
actgcttatgacaaggcatctgaagcttggactagatgctcaccaaatccattggagctc
aaaaggttggcggcttatgctcgaagcagtgcaagcttgttgacaaaactcatattgcaa
aatcagactgattcccgtggatgggaggtgcattatacatgccttctccgaactccactg
agcctctatgatgctgtaatacttctccatggagatagattaccttacccaaaacgtctc
ctcttcacatctgaactggaccaaggtatattccttggaggcaaagggcggcatgtggct
catggcaatgctagcacttgtttccaccccttcctattgccttctgatatgaagggtagc
agcttagagcaacttaaaaccaagctaatggtaaactttgatccactaaggtgctttgtt
ggagatgtagagaaagggttctccaacagattgaagttatggtatgattcattaggaggt
gatgctatcggtctaacatgggaacggtcaaagaaacgagaacgagaagaggaagagacg
gacagaaaatatccggttgatttgttgagaaatataggtgaactggggaaaggatttgtg
agagatgtttatctgctcaaggctcccaggctttcgagttaa
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