Gossypium raimondii: 105803814
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Entry
105803814 CDS
T04129
Name
(RefSeq) plant-specific TFIIB-related protein 1 isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
gra
Gossypium raimondii
Pathway
gra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105803814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105803814
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
105803814
Prokaryotic type
Archaeal type
TFB
105803814
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
zf-UBP
Motif
Other DBs
NCBI-GeneID:
105803814
NCBI-ProteinID:
XP_012491666
UniProt:
A0A0D2SNJ8
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Position
11:42526951..42530081
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AA seq
528 aa
AA seq
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MKCPYCSAAQGRCATTSTGRSITECTSCGRVVEERQFQNHHLFHVRAQDTPLCLVTSDIP
APASAYQIHEDDPFEPTGFITAFSTWSLEPNPLFLRSSLSFSGHLAELERILELSSSSAP
SATSSSTVVVDNLRAYMQILDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATA
ALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCT
LLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGL
TEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTIATGRSSVPRVDSIDLSSTADR
DKQQDSKPIKPNDVSEAGLQARGKDDAENNGNSSGTHAAMLNRPPHFRQPWLQFGAPNVR
TVGDKNQTTIGGDISEAQPSCPESEQKVDMPKIDTKGASSSLRPSQFSSSPASNVSTITW
PFRSPASSGPSPNMPIVHPPKLPPGFAELKGSGTQNGSKVTNPSGDSK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtccgtattgctcggcggcgcaaggtcggtgcgccaccacgtcaaccggccgg
tccataacggagtgcacctcttgcggacgtgtcgtcgaagagcgccaattccaaaaccac
cacctctttcacgtgcgtgcccaagatacccctctctgcctcgtcacctccgacatccct
gctcccgcttccgcttaccaaatccacgaagacgacccctttgagcccacgggatttatt
acggccttttccacatggtccctcgaacccaatccactcttcctccgctcctctctctcc
ttttcgggccacctggcggagctcgagcggattctagaactctcttcgtcttcagcccct
tcggcaacttcgtcttcgacggttgtggtggataatttgagagcgtatatgcagattctt
gacgtggcgtcgattttggggttggattgtgatatatcggatcacgcgtttcagttgttt
agggattgttgttcggctacctgtttgaggaaccggagtgttgaggcgcttgctactgct
gctcttgttcaggccattagggaagctcaagagcctcgaaccctccaggaaatctctatt
gctgccaatgtaccacagaaagagattggcaagtacatcaagatcctgggagaagcttta
caattaagtcaacctatcaatagtaattctatatcagttcatatgccgagattttgcact
ctccttcagctcaataaatctgcacaggagctggcaactcatatcggagaagttgtgatc
aacaaatgcttttgcactcgccgaaatccgattagtatatctgcagctgctatatatctg
gcatgccaattagaagacaaacggaagacgcaggctgagatatgtaaggtgacaggtctc
acagaagtcaccctccgaaaagtctacaaggagctattagagaattgggatgatctactt
ccgtctaattatactccagctgtccctcccgagaaagcatttcctacaactacaattgcc
acgggccgatcttcagtgcctagagttgattcaattgatctgagttctacagcggaccga
gataagcagcaagactcaaagccaattaagcctaatgacgtgtcagaagcaggccttcaa
gctagaggcaaagatgatgcagaaaacaatggaaattcttctggaacccatgctgctatg
ttgaaccggccaccacatttcaggcagccctggcttcagtttggggctcccaatgttagg
acagtaggagataaaaaccagactaccattggaggagacattagcgaagcacaaccaagc
tgtccagagtcagaacagaaagtagatatgccaaagatagataccaagggtgctagtagt
tccctaaggcccagccaattctcaagctctcctgcttcaaatgtgagtaccatcacttgg
ccatttcgttcgccagcctcatcagggccttcgccaaacatgcctattgtgcatcctcca
aagttgccaccaggttttgctgagcttaaaggatccgggactcaaaatggaagtaaagtt
accaatccgagtggagattccaagtga
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