Gossypium raimondii: 105803837
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Entry
105803837 CDS
T04129
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gra
Gossypium raimondii
Pathway
gra00900
Terpenoid backbone biosynthesis
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Module
gra_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
105803837
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gra01006
]
105803837
Enzymes [BR:
gra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
105803837
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
105803837
2.5.1.29 geranylgeranyl diphosphate synthase
105803837
Prenyltransferases [BR:
gra01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
105803837
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Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
105803837
NCBI-ProteinID:
XP_012491701
UniProt:
A0A0D2SNN1
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All DBs
Position
11:complement(42078605..42080236)
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AA seq
371 aa
AA seq
DB search
MASLNLGYWVQSYSMPNQVSSISKSFPLPRSLPFNPLTTQSSSTLKKVNFSSLPSITSVL
TKEDIVKEEEQDPQKSSFDFNSYMLQKASAVNQALESAVSLRDPVKIHEAMRYSLLAGGK
RVRPVLCLAACALVGGRESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVF
GEDIAVLAGDALLAFAFEHIAVSTVGVPPSRIVRAIGELAKAIGGEGLVAGQVVDIISEG
LTDVGLDHLEFIHVHKTAALLEAAVVLGAIVGGGCDEEVEKLRKFARCIGLLFQVVDDIL
DVTKSSKELGKTAGKDLVADKVTYPKLMGIQKSKEFAEKLKTDAIELLQGFDPAKAAPLI
ALANYIAYRQN
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattgaatctgggttattgggttcagtcttactccatgcctaaccaagtttct
tccatatccaaatcctttcctttacctagatctcttcccttcaatcctctcacaactcaa
tcatcttctaccctgaaaaaagtgaacttctcttctcttccttccattacctcagtcctt
accaaagaagacattgtcaaggaagaagaacaagaccctcaaaagtcaagctttgatttc
aattcctacatgcttcaaaaagcaagtgcagttaaccaagccttggaatctgctgtttca
ctccgtgaccctgttaaaatccacgaagcaatgcggtactcccttttagcaggtggaaaa
agggtacgtccggtgctttgtttagcagcctgtgcacttgttggtggccgggaatccatg
gctatgcccgcagcttgtgctgttgaaatgatccacaccatgtctttaatccacgatgat
ttgccttgcatggacaacgatgatcttcgtagaggaaaaccaaccaaccacaaagttttt
ggtgaggatatagctgtgttagcaggggatgctcttttagcttttgcttttgaacatata
gctgtttctacagttggtgttccgccttccaggattgtaagagctattggggaattagcc
aaagctattggaggggaggggttggtggctggtcaagtcgtggacataattagtgagggg
ctaacagatgtgggattggatcatttagaattcattcatgttcacaaaactgctgctttg
ctcgaagcggctgtggttttgggcgccattgttggaggtggatgtgatgaggaggtggaa
aagttaaggaaattcgcaaggtgcattgggcttttgtttcaggttgtggatgacattctt
gatgtaaccaagtcgtctaaggaattagggaagactgcagggaaagatttggtggctgat
aaagtgacttatccaaagttgatggggatacagaaatcaaaggagtttgctgagaagttg
aagactgatgcgatagagttgcttcaaggatttgaccctgccaaagctgctcctttgatt
gctttggctaattatatagcttacaggcaaaactaa
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