Gossypium raimondii: 105803932
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Entry
105803932 CDS
T04129
Name
(RefSeq) probable E3 ubiquitin-protein ligase HIP1
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105803932
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105803932
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105803932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf_RING_Vps8
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
105803932
NCBI-ProteinID:
XP_012491833
LinkDB
All DBs
Position
11:39848078..39850474
Genome browser
AA seq
613 aa
AA seq
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MQGQGNGSNSFPFRNFYSNGDLGSDHRNVVPDALVHDGDEHTSMRWIGQPNYSLDTQNHV
GFSQFLGNDFGLSPLGDQVGTNQRSEPTFNPFFENNSGVTVNGHTSSENGSIGSSLFLGR
EAGSGLLQLQRNLDLNDVVHEGSGVDAGQGNGPYLSLDLFRAGTRTTEGDHDHIQTFDGS
SSSPVMISSGIAGYILEENINSDGLPVNGQTRLLCKRKAPEYATGGSASSARQAANSHQL
GTNIAQHNVRNCSSAVNPFNRIHSGHGAALPTPSNFYQVPTEARQADNFQRNTRLRRTAS
QPIPTSANLAPMPVLANPAMQQPTVQVSNSLQAPQPSQYWNGTTVSWIVPSISILRQEDN
LRNNRRHMMMSLANMQENLNLANENSNFIENVASSSRIQFGPGMHLSCSSIRSPHPNMVE
QYRQSVRDIANPSEFWWQGNHYPIHFGVFLAVQDMDIPERGGNPRPTQVPLRLGPRAERQ
VGDNSGLSSTVLSQTAAQSSRLVSEVRNALGLVGGHGGLRLEELLDLEEQVGNVCIGLSE
EAILGNLRRRKYQSLTMGPLIETEPCCICQEDYANGEELGLLDCGHDFHFNCIKQWLVEK
NSCPICRKTALAI
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtcaaggcaacggctccaattctttccctttcagaaacttttactccaatggt
gatcttggatctgatcatcgtaatgtggttcctgatgctttagttcatgacggagacgaa
catacttccatgagatggattggtcaacccaattatagtcttgatacccaaaatcatgtt
ggctttagtcaattcttgggcaatgactttgggctttcgcctcttggtgatcaggttggt
acgaaccaaaggtctgagccaacttttaacccttttttcgaaaataatagcggtgtcacc
gttaatggtcacaccagtagtgaaaatggttcgatcggctcatcgttatttctagggcga
gaggctggttctggtcttctacaactacaacgtaacttagacctgaatgacgtggtacat
gaaggaagcggagtcgatgcaggtcagggtaatggaccatacttatcattagaccttttt
agagctggaacaagaacaacggaaggagatcatgatcacattcagacctttgatggttct
tcttctagcccagtcatgatttcctcaggaatagcgggatatattctagaagaaaatata
aatagcgatggccttccagtcaatggtcagacaaggcttttatgcaaaagaaaggcacct
gaatatgctactggtggtagtgcaagctccgcacggcaagctgccaattctcaccaacta
gggactaatattgcccaacataatgtcagaaattgctcaagtgcagttaaccccttcaat
agaattcattcaggacatggggctgctttgccaacaccctctaacttctatcaagttcca
acagaagctaggcaagctgacaactttcaaagaaatacccgtttgagaaggactgcaagt
caaccgattcccacatcagcaaacttagcaccaatgccagtgctagcaaatccagccatg
caacaaccaactgtgcaagtctccaactcgttacaagctccacaaccttcccaatattgg
aacggaacaaccgtgtcatggattgttccttctatctctatattgcgacaggaagacaac
ttaagaaacaacagaagacatatgatgatgtctttggcgaacatgcaagaaaacctcaac
ttggccaatgagaattcaaacttcattgaaaacgttgcctcctcttccaggatccaattc
ggtcctggcatgcatctatcgtgttcgtccataaggtcccctcatccaaatatggttgaa
caatacagacaaagtgtgcgagatattgccaatccatctgagttctggtggcaggggaat
cactatccgatacattttggtgttttcctagctgtccaagacatggacattccagagaga
ggtggcaatcccaggcctactcaggttcctctgaggttgggaccaagagctgagagacaa
gtcggtgataattctggactctcatcaacggtattatctcaaactgctgctcaaagtagt
agactggtatctgaggttcgcaatgccttgggacttgtaggtgggcatggtggcttacga
cttgaggaactactggacctggaggagcaagttgggaacgtttgcattgggctaagcgag
gaagctattttggggaatctgagaaggcgaaaatatcaatccttaacaatgggacctcta
atagaaactgaaccctgctgtatttgtcaggaggattatgctaatggcgaagagcttggt
ctgctggactgtggtcatgactttcacttcaattgcattaagcaatggctggtggagaag
aattcatgccccatatgcagaaagacagctttggctatttaa
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