Gossypium raimondii: 105804249
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Entry
105804249 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: asparagine--tRNA ligase, cytoplasmic 2
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
gra
Gossypium raimondii
Pathway
gra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105804249
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gra01007
]
105804249
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gra03016
]
105804249
Enzymes [BR:
gra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
105804249
Amino acid related enzymes [BR:
gra01007
]
Aminoacyl-tRNA synthetase
Class II (A)
105804249
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105804249
Prokaryotic type
105804249
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
MIC19_MIC25
Motif
Other DBs
NCBI-GeneID:
105804249
NCBI-ProteinID:
XP_012492223
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Position
7:complement(5527468..5530846)
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AA seq
613 aa
AA seq
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MESQEPKVTGSPLMYSNRVTLKTILESSDGEMVLVGETVVVGGWVKCYKEVKKHRASDTD
HASPGRQGLTCLGILKSRIPRFRTIIRILCGPASSPAVREELEPLVPKPTLPSTFFLQIN
DGSCTSCLQVVIDSTIAPVSAGQILPTGTCILARGVLEKLSANEKQIIQLKAEKILHVGT
VEQDKYPLSRERLPLDSLREYPHIRPRTTMVSCVTRIRAXLDFATHTFFQKYGFLHVQVP
IITTTDTEGFSEKFHVTTLLGKTSKEKEPVGVSDADVVSLETAKAAVKEKSAVIEQLKRS
DGNKESLIVAVQDLQKTNELARQIEAREKSKPVTAVKPDLLNFNDDFFGRPSYLTVSGRL
HLESYACDIGNVYSFGPRFQADKTVSSKHVAEMWTVEVEMAFSELGDAMECAEDYFKFLC
KWILDNCPEYMKFVSKTIDNTITHRLEYMTTSSYDKISYGEAVEILRKVPDKAFETQLQW
GVPLTAEHLSYLADDHYQRPVIIYDYPKAVKPFYVRLNEDGKTVAAFELVVPKIGTVITG
SQNEESFNVLNTRITEFDLSIDQYEWYLDLRRHGTVKHSGFSLRFDLMVLLTTGLIDVRD
VIPFPRSHGKANS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcaagaaccaaaggttaccggctcccctttgatgtactccaaccgggtgacg
ttgaaaaccatattggaaagtagtgatggcgagatggtgttggttggtgagaccgtggtg
gttggtgggtgggtcaaatgttacaaggaggtgaagaagcaccgtgcttccgacactgac
catgcctctccggggcgtcaaggcttaacctgtttgggtattcttaaatctcgaatccca
cgtttcaggactattattaggattttgtgtggtcctgctagttccccagctgttcgagaa
gagctcgagcctttggttcccaaaccaacacttccttccactttctttctacaaattaat
gatggctcttgcacttcatgtcttcaagtcgtgattgattcaacgatagctccagtatct
gcaggccagattctaccgactggaacatgtatattagcccggggtgtcttggaaaaactt
tcagctaatgagaaacaaataattcagcttaaagcagaaaagattcttcatgttggaact
gttgagcaagataagtatcctttgtcaagggaaagactacctcttgattctttaagggag
tatccccatattcgtcccaggacaactatggtgtcatgtgttacacgaattcgggcancc
ctagattttgcaacccacacattcttccagaaatatggtttcctacatgtgcaagtgcca
atcatcacaactacagacactgaagggtttagtgaaaagtttcatgttacaactcttttg
ggaaaaacaagcaaggaaaaggagccggtcggtgttagtgatgctgatgttgttagcctt
gaaactgctaaggcagctgttaaggagaaatcagcggtaattgaacaactcaagagaagt
gacgggaataaagagtcacttattgtagcagttcaggatctgcagaaaacaaatgaatta
gcacggcagatcgaagcaagagaaaaatccaaaccagtaactgcagtgaagcctgactta
ctgaacttcaatgatgatttctttggtcgccctagttatttaactgtctctggtcgcttg
catttggagagctatgcatgtgatattggaaatgtctactcattcggacccagatttcaa
gctgataaaacagtgtcctccaaacatgtggctgaaatgtggactgttgaggtagaaatg
gctttctcagagttaggggacgctatggaatgtgcagaggactatttcaaatttctctgc
aaatggatattggataactgtccagaatacatgaagtttgtctcaaaaacaattgacaat
actattactcatcgtcttgaatacatgacgacaagttcttatgacaagatttcctatgga
gaggcagtagaaattttgagaaaggtcccagataaggcttttgaaacacaactacagtgg
ggcgtccctttgacagccgaacatctaagctacttggccgatgatcactatcagaggcct
gtaattatttatgattatccaaaagcagttaagccattttatgtacgcttgaatgaagat
ggaaaaacagttgcggcctttgagctggttgtacccaagattggaacagtgataacaggg
agccaaaatgaagagagctttaacgtgctaaatacaaggatcacggaatttgacttgtca
atagatcaatatgaatggtacctagatcttcgccggcatggaaccgtcaagcactctgga
tttagcctacggtttgacctgatggttctccttaccaccggcctcattgatgtcagagat
gtaattccttttcctagaagtcacggcaaagccaacagctaa
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