Gossypium raimondii: 105804314
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Entry
105804314 CDS
T04129
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105804314
Spliceosome [BR:
gra03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
105804314
Other components
Complex C specific factors
105804314
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
105804314
NCBI-ProteinID:
XP_012492330
UniProt:
A0A0D2PEH9
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Position
11:complement(20880867..20884310)
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AA seq
853 aa
AA seq
DB search
MDEYQEMERFGMENDFEDAQWIDGEFYYKKRKEKRTQTKDDVIYGVFASDTDSEDGGSSS
SRKRRKEFGKKADLTKPVNFVSTGTVMPTQEIDNNSKVENDNSVPDDNGNDSRPGLGSGV
GLGFGGNDSLPKSDGNIVADEDGDTSFLPTAFGRKIKEGAQRREKERERLKMEKKSLGGR
REAGGGNGDVGSFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEAKMRPKNMGMGFN
DFKEAKLPGLQQLEEKKSVSQQPVGKAKERLWSKNAKGRKKEEYITVEELLAKKQEEGVE
IVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNLKLIVDLAELDIQKIDRDL
RNEKETALSLQKEKEKLEIEASHQKQHLANMEQIVSVLGQIEEENSSGKLTLESLANSFR
DLQKNYADDYKLCNLSCIACSLALPLFIRMFQGWDPLVNPSYRMEVISAWKDLLQIDGSY
DIWEDAATPYCQLISEVVLPAVRISGINTWEPRNPEPMLGFLESWEKLLPSPILQIILDT
VVMPKLSRAVDSWNPRKETVPIHVWVHPWLPMLGPKLEGLYQTIRMKLSNVLDAWHPSDP
SAYAILSPWKTVFDSVSWEQLMRQYIVPKLQIALQEFQINPADQKLDQFYWVMSWASAIP
IHLMVDLMEKFFFVKWLQVLYHWLCSKPDFEEIKNWYMGWKGLLPQELLANESIRNQLNC
GLEMMVQAADHVPVVQPGLRENVTYLKVREQRQFEAQQRAAAHAQQPAAAQMDGVPEMSL
KEVVEAYAQQHELLFKPKPGRMHNGQQIYGFGNISVIVDSLNQKIFAQKDNGWSLVSLDD
LLKMHYNSLARRR
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatatcaagagatggaaaggtttgggatggagaacgattttgaagacgcacaa
tggatagacggcgaattctactacaaaaagcgcaaagaaaaacggactcagacaaaagat
gatgttatttatggtgtttttgcatctgataccgactctgaagacggtggttcttcttca
tcgaggaagagaaggaaagaatttgggaagaaagccgacttgacgaagcctgtcaacttt
gtttctacaggtactgtaatgcctacccaagaaatcgataataattctaaggtagagaac
gataatagtgttccggatgataatgggaatgatagcaggcctggattggggtctggcgta
ggtttagggtttggtggaaatgatagcttgcccaaaagtgatggtaatattgttgctgat
gaggatggtgatactagttttttgcctactgcctttgggaggaagataaaggaaggggca
caaaggagagagaaagagagggagaggttgaaaatggagaagaaaagcttaggaggcaga
agggaggctggaggtggtaatggtgatgttgggtctttcgagaagcatactaagggtatt
gggatgaagttgcttgagaaaatggggtataaaggaggtggtcttgggaagaatgagcaa
ggaattgttgcacctattgaggcaaagatgaggcctaagaatatggggatggggtttaat
gattttaaggaggctaagttgccagggttgcagcagttggaagagaagaaaagtgtgagt
cagcagcctgttgggaaagcaaaggagaggctttggtcgaagaatgcaaaggggaggaaa
aaggaggagtatattacagtggaagagttgttagcaaagaagcaagaagagggtgttgag
attgttcagaaggtgattgatatgagggggccacaagtaagagttttaaccaacttggag
aatctagatgctgaagagaaggcaagagagaatgatgttccgatgcccgagttgcagcat
aatttgaagttaattgttgacttggcagagcttgatattcagaagattgatagggattta
aggaatgaaaaagagacagcattgagcttgcaaaaggagaaggaaaagttggagattgag
gcttcacatcagaagcaacatttggctaatatggagcaaattgttagtgtgcttggccag
attgaggaagagaactcatctgggaaattgaccttggagtcccttgcaaatagttttagg
gatttgcagaaaaattatgctgatgattacaaattgtgtaacttgtcctgcattgcatgt
tcattagctttgcctctgtttataagaatgtttcagggttgggatcctcttgtgaatcca
tcttacaggatggaggtgatatcagcatggaaggatttattgcaaatagatggtagttat
gacatttgggaggatgcagcaacaccttattgtcagttgatctcggaagttgttttacca
gctgtgaggatatctggcataaacacatgggagcctaggaaccctgaaccaatgcttggt
tttttggaatcatgggaaaagttacttccgtcacctattcttcagatcatattggatact
gtggtaatgccgaaattgtcaagagcagttgactcatggaatccccgtaaggaaactgtt
ccaatccatgtctgggttcatccatggttgccaatgttggggccgaagttggagggcttg
tatcaaaccatacgtatgaagttgagtaatgttcttgatgcttggcacccaagtgatcca
tctgcttatgctatactatcaccttggaagactgtttttgattcagtgagttgggaacaa
cttatgcgccaatatatagtccccaagttgcagattgctctgcaggagttccaaataaac
cctgcagatcagaagcttgatcagttttattgggttatgtcttgggcctctgcaattccc
attcatctcatggttgatttgatggagaaatttttctttgtaaagtggctgcaggttttg
tatcattggttgtgttcaaaacccgactttgaggagataaaaaattggtacatgggttgg
aagggacttctgccacaggagcttttggctaatgaaagcatccgcaatcaacttaactgt
ggtcttgagatgatggttcaggctgctgaccatgtaccagtagtgcagcctggtttgagg
gagaatgttacgtatcttaaggtgcgtgagcagaggcagtttgaggctcagcagagagca
gccgcacatgcacaacagccagctgcagcccagatggatggtgttcctgagatgagtttg
aaggaggtagttgaggcctatgcacagcagcatgagttactattcaagcccaagcctggc
aggatgcataatggtcaacagatatatggcttcggtaacataagtgtaatagttgattca
cttaaccagaaaatttttgcccaaaaggataatggctggtccctggtctcacttgatgat
ttgttgaaaatgcactataattctcttgcgaggagacgttga
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