Gossypium raimondii: 105804378
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Entry
105804378 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105804378
KO
K15559
regulator of Ty1 transposition protein 103
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105804378
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105804378
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
CID
CTK3
ALIX_LYPXL_bnd
TetR_C_34
Motif
Other DBs
NCBI-GeneID:
105804378
NCBI-ProteinID:
XP_012492427
UniProt:
A0A0D2TL86
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Position
11:18987695..18998608
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AA seq
588 aa
AA seq
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MSNDVFDGQILTEKLSKLNNSQQSIESLSRWCITHRKKAKQIVETWDKLFNSSQKERCVS
FLYLANDILQNSRRKGSEFVNEFWKVLPVALKHVYDDGDEYGKKAVARLVDIWEERKVFG
SRGQNLKDEMLGKNPAPPPPAPVAVNNGKGSNPIKIVKRDAHAVRIKLAVGGLPEKILTA
YQSVLEDNPSEDTVLNKCNAAVQNLSKLEENAESCLAQGNQNGSALLDELQLQENALRQC
VEQLESIETTRAALIFQLKEALQEQESKLELICSQLQVARGQIEQGSNLRKRLTLPSVHG
HVTTTSIPTGEAVAVSERNLPSAQPSGTLPQPLLPQPMISFAPSKTTEEDNKKAAAAAVA
AKLAASTSSAQMLTSVLSSLVAEEAASMNGSLKSGGFTSGLSMFPPEKRPKLEKPMPVSD
ASDIPSTTHFNPLQQQAINNMPLAPSTGMQPMSQGNQIQAPFASAPPPPLSPANPSGSQY
MQSTGMMMGVMPYGYGANTLPPPPPLPPHIAMNLARPASQPLQPPQPPQSQSQSSQQPQP
QPQPQSQPQQQPQSQPQQQQPATGGFYWPPGMGFYGQNPQSTPAVPRQ
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgacgtttttgatgggcagatactgaccgagaaactgtcaaaactaaacaat
tcgcaacaaagcattgaatcattgtctcgttggtgtattactcatcggaagaaggcaaaa
cagattgttgaaacatgggacaaactgtttaactcttcccagaaagaacgatgcgtttct
tttctgtatttggctaatgacattttgcaaaatagtaggcgaaagggaagcgagtttgta
aatgaattctggaaagttcttccggtagctctcaaacatgtgtatgatgatggtgatgag
tatggaaagaaggctgtagccagactggttgacatatgggaagaaagaaaagtttttggt
tctcgagggcaaaatcttaaagatgaaatgcttgggaagaatcctgctcctcctcctcct
gctcctgttgcagtgaacaatggaaaaggctcaaatcctatcaagatagtgaagagggat
gctcatgcagtgagaattaaattggctgttggaggtcttccagaaaagatactaactgca
taccaatctgtgctcgaggacaatccaagtgaggatactgttttaaacaagtgtaatgct
gctgtacaaaatttgagtaaactagaggaaaatgctgaaagttgtttagctcaagggaat
cagaatggatctgctttgctagatgagctacagctgcaagaaaatgctctccgccaatgt
gttgaacaacttgaaagcattgaaacaaccagggctgccttgatttttcaacttaaagaa
gcacttcaggaacaagaatcaaagctggagcttatttgtagtcagcttcaggttgctcgt
ggtcagattgagcaaggaagcaatttaaggaagaggctgactttaccctctgtgcatggc
catgtaactactacatctatccctacaggtgaggctgtagctgtgagtgaacggaacctt
ccttcagctcagccatctggcactctacctcaaccgcttcttccacagcctatgatttca
tttgcaccttcaaaaacgaccgaagaagataataagaaagcagcagctgctgctgtcgct
gctaagcttgctgcttcaacatcctctgctcagatgcttacatctgtactttcgtccctt
gttgcagaagaagctgcctctatgaatggtagcttaaaatccggtgggttcacatcaggg
ttatcaatgtttcctccagaaaagcgccccaaacttgagaaaccaatgcctgtatcagat
gcttcagacatcccaagcacaactcatttcaaccctttacagcagcaggcaattaacaac
atgccacttgcaccatcaactggtatgcaaccaatgtctcaaggcaaccagattcaggct
ccctttgcttctgctccacctccccctctctctcctgcaaatccttcaggaagtcaatat
atgcagtcaactggtatgatgatgggggtgatgccttacggatatggagcgaacacgctg
ccaccacctcctcctcttcccccacatatagcaatgaatttagctaggcctgcttctcag
ccactacagcctccacaaccacctcagtctcagtctcagtcttcgcagcagccacagcca
cagccacagccacagtctcagcctcagcagcagccgcaatcccagcctcagcagcagcag
ccagccactgggggattttactggccaccaggtatggggttttacgggcaaaaccctcag
tcaacaccagctgtacctcgacagtaa
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