KEGG   Gossypium raimondii: 105804404
Entry
105804404         CDS       T04129                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
gra  Gossypium raimondii
Pathway
gra03030  DNA replication
gra03410  Base excision repair
gra03420  Nucleotide excision repair
gra03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105804404
   03410 Base excision repair
    105804404
   03420 Nucleotide excision repair
    105804404
   03430 Mismatch repair
    105804404
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gra03032]
    105804404
   03036 Chromosome and associated proteins [BR:gra03036]
    105804404
   03400 DNA repair and recombination proteins [BR:gra03400]
    105804404
DNA replication proteins [BR:gra03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105804404
  DNA Replication Termination Factors
   ELG1-RFC complex
    105804404
Chromosome and associated proteins [BR:gra03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105804404
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105804404
  Check point factors
   HRAD17(Rad24)-RFC complex
    105804404
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 AAA_lid_RFC1 Sigma54_activ_2 AAA_22 Mg_chelatase AAA_23 RuvB_N nSTAND6 AAA_5 DUF815 ABC_tran AAA_29 RsgA_GTPase AAA_16 AAA_2 AAA_24 TPGS1_C T2SSE nSTAND3 TsaE
Other DBs
NCBI-GeneID: 105804404
NCBI-ProteinID: XP_012492457
UniProt: A0A0D2PET7
LinkDB
Position
11:complement(17760808..17765066)
AA seq 354 aa
MLWVDKYRPKTLAQVIVHEDIAQNLTKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQIFG
PSAEKVKVENRNWKIDAGSRTIDLELTTLASTNHVELSPSDVGFQDRYIVQEIIKEMAKN
RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSR
CLNIRINAPSAEQIVKVLEFIGKKEGLQIPSGFAARIAEKSNRNLRRAILSFETCRVQQY
PFTSNQAIPPMDWEEYISEIATDIMKEQSPKRLFQVRGKVYELLINCIPPEIVLKRLLHE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggttgataaatatcgacccaaaaccctagctcaagtcattgttcatgaagac
attgcccaaaatctaacaaaactggttactgagcaagattgcccgcatttactcttctat
ggaccatctgggtctggcaagaaaaccctaatcatggcccttcttagacaaatatttggt
cccagtgctgaaaaggtgaaagtggagaataggaattggaaaattgatgctggaagtaga
accattgatcttgagttgaccacattagcaagcacgaaccatgtggagttgagtccaagt
gatgtaggctttcaggacagatatatagttcaagagattattaaagaaatggctaaaaat
agacccattgacacaaaagggaaaaagggatttaaagtgctagtactcaatgaagttgac
aagctttctagagaagctcagcattctctccgtagaacaatggagaagtacagtgcttct
tgccggctaattttgtgctgtaatagttcttcaaaagtcactgaggcgattcgatctcgc
tgtctgaatatccgaataaatgcaccttcagcagaacagattgttaaggtgttggagttc
attggaaagaaagaagggctgcaaattccatctggttttgcagcccgcattgctgaaaag
tcaaaccggaatttaaggagagctatattgtcatttgagacttgccgtgttcaacagtat
ccttttacaagcaaccaagcaattccgccaatggattgggaagaatatatatcagaaata
gcaactgacataatgaaggaacagagtcctaaaaggctgtttcaggttagaggcaaggtg
tatgaattgctcatcaattgcatccctccagagattgtcttgaagaggctcctccatgaa
ctattgaagaaattggatgcagagctaaagcatgaggtttgccattgggctgcatattat
gagcataggatgcgtcttggacagaaagccatctttcacattgaagcatttgttgccaaa
ttcatgagcatttacaaggctttcctgattgcaacatttggctga

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