Gossypium raimondii: 105804510
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Entry
105804510 CDS
T04129
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105804510
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105804510
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105804510
NCBI-ProteinID:
XP_012492609
UniProt:
A0A0D2QZT0
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Position
11:complement(15175097..15176835)
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AA seq
439 aa
AA seq
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MAAHSYSLFLLISLSFVVQIPTPQAHIAEYDDYWKARKLEAIENLNKAYHPNPEEVVHHY
NDQFAKTMIKLNSTRRELKGTKENGPCEITNPVDSCWRCDPNWEKNRKRLADCAPGFARG
TTGGKEGEFYVVTDPSDDILNPKPGTLRHAVIQRRPLWITFKGSMIITLEQELIITSNKT
IDARGANVQIAKGAGITVQFVKNVIIHGLHIHHIITGTGGTIRDAEDHFGLRTASDGDGI
SLFGATNIWLDHLSVTNCSDGLIDVIQGSTAVTISNCHFTDHNEVLLFGASDSYTEDQKM
QITVALNHFGKGLVERMPRCRHGFIHVVNNDYTHWLMYAIGGSRNPTIISQGNRYTASST
FASREVTKRVFAPPEVWKKWNWISEGDHFENGAFFVSSGDPKASKKYGTNKMMPFNPGEM
APKLTKYAGTLNCKPGKPC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcatagttatagcttgtttctcttaatttccttgtcttttgttgtccaaatc
ccaacccctcaagctcacattgctgaatatgacgattattggaaggcacggaaattggaa
gccattgagaacctgaacaaggcttatcaccccaatcctgaggaggtggtccaccattac
aatgaccaatttgccaaaaccatgattaagcttaatagcaccagaagggagttgaaggga
acgaaagaaaatggtccatgtgaaataaccaaccccgttgatagctgctggcggtgtgat
cctaactgggaaaaaaacaggaagaggctggccgattgtgcccctggatttgctcgtggt
actaccggtggaaaggagggtgagttttacgtggtcactgacccttctgatgatattctt
aaccccaaacctggaactctgcgtcatgctgtcatccaaagaagaccactttggatcact
ttcaaaggatccatgatcatcaccctggaacaggagctcattattacaagcaacaagacc
attgatgctaggggagccaatgtgcagattgctaagggtgctggtattacggtccagttt
gtcaagaacgtcattatccatggcctccatatccatcacattattaccggcactggtggc
accatcagggatgctgaagaccacttcgggttaaggactgccagcgacggagatgggatc
tctctgttcggagcaaccaatatttggctcgaccatctttcggttaccaattgctccgat
ggtcttatcgatgttattcagggttccactgccgttaccatttccaactgccatttcact
gaccacaatgaggtgttgttgttcggagcaagcgactcctacactgaggaccagaagatg
cagataaccgtcgctttgaaccacttcggtaaaggattggtagagaggatgcctaggtgc
cgacacggttttatccatgtcgtcaacaacgactacactcactggctcatgtatgcaatt
ggcggcagccgcaatcctacaattatcagccagggcaacaggtataccgcgtcatccacc
ttcgcgtctagggaggtgaccaaaagggtgttcgcaccacccgaagtctggaagaaatgg
aactggatatcagagggtgaccatttcgagaacggtgccttttttgtttcatccggtgat
cccaaagccagcaagaaatacggtaccaacaaaatgatgcctttcaatcccggtgagatg
gcccccaaactcaccaagtatgccggaacactcaactgcaaacccggcaagccttgctaa
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