Gossypium raimondii: 105804700
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Entry
105804700 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105804700
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gra03016
]
105804700
Enzymes [BR:
gra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
105804700
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
105804700
Prokaryotic type
105804700
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
105804700
NCBI-ProteinID:
XP_012492856
UniProt:
A0A0D2SL97
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Position
11:10481054..10487014
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AA seq
730 aa
AA seq
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MWRCGVSSLKPNCYFHCKRNYLSLSKSNLTKHPITKYSNYSSLTMTTITESDVGILCFIS
NLPGFRGILKQRYSDFIVNEVDTEGNVVHLTSLDAPPEEGETKISDQLNKNYASEIEKFR
SLACEIDVDQLEAFINQITSGSEEDISPIVLSPDSDKSHRTAMHNFFKENLRFLVTDTVD
GPDSSSKCIRVRLNSGNKNKGRNSNKRKRGDRPYDSRGSSHWPAHLGNFLRFHLFKENKD
TQEALGLIGKMLGIQPRSFGFAGTKDKRSVSTQRVTVFKQYASRLAALNDRLIGIKVGDF
CYVKDDLLLGQLLGNRFTIVLRGVVADSEDTIQASAESLGRHGFINYFGLQRFGSGSIPT
HHIGATLLRGEWKAAASTILDPREGERNIISKAREYYKQTGDIDGTLKQLPRHLVAERAM
LQCLKKSPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASVRVQKYGSSEVVLGDLVYSK
GDDAEKTEVVPPEHEDNSLEDAYDCGQLDEISGKDLPLEKNNLVKVITASDISTGNYNIE
DVVLPMPGSRIIYPMNEVADVYHDMAKKDGISLTESVHNIKEFSITSMTGSYRRVFQKPI
DFRWDLLSYTDGNLALSETDIDKIAKTKPVNPVKEENPTNGTEGEEPFNHLEQLESFEDE
KKFSTDDNEVEVSREAEHPQVHSPPDLNSLEPQKALKLAFTLPASCYATMAIRELLKTST
SVAFHKTLNQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgttgtggtgtctcaagtctaaaacccaactgttacttccactgcaaacggaac
tacttgtcactttcgaaatcaaacttgacaaaacacccaatcacgaaatactcaaattat
tcaagtctaacaatgacgaccatcaccgaatccgatgtgggaatcctctgtttcatctca
aaccttcctggttttcgtggcatcctcaaacaaagatattctgatttcattgtgaatgaa
gtagacactgagggaaatgttgttcatttgacctctttagatgcccctccagaggaaggt
gaaacaaaaatatctgatcaacttaacaaaaattatgcatctgaaattgaaaaattcaga
tcacttgcctgcgaaattgatgtcgatcagttagaagctttcattaaccaaattacttca
ggcagtgaagaagatatctctcccattgttctgtctccagattctgataaatctcatcga
acggcaatgcataatttctttaaggagaatcttagatttctagtcactgacactgttgat
ggacctgattcttcctcaaaatgcatccgcgtgaggttaaattctgggaataagaacaag
ggaagaaattcgaataaaaggaagagaggtgataggccctatgatagtagaggttcaagc
cactggccagcgcatcttggcaattttcttaggttccatcttttcaaggagaataaagat
acacaggaagccttaggattaataggaaagatgcttggcattcagccaaggtcttttggt
tttgcgggtacaaaagataagaggtcagtttccactcaaagggtaactgttttcaagcag
tatgcaagtagattagctgccctcaatgacaggttgattggtattaaggtgggagacttc
tgctatgtcaaggatgacctcctccttgggcagcttttaggaaaccgattcaccattgta
ttacgaggagttgttgcagattctgaagatactattcaagcatctgcagagtccttgggg
aggcatggcttcatcaactattttggcttacaacgttttggaagtggttctattccaact
caccacattggtgccacattactgcgaggcgaatggaaagctgctgcaagcactattctt
gatccaagagaaggggaaagaaatatcataagcaaggcaagggaatattataaacaaact
ggtgacatagatggtactctcaagcaattacctcgccatttagttgcagaaagggctatg
ttgcaatgtttgaagaaaagtcctgggaattacttgcaagccctgaaagctatacctagg
acgttgagaatgatgtatgtacatagttaccaaagctatctgtggaaccatgcagcaagt
gtgagagtgcaaaaatatggaagcagtgaagttgtgttgggagacttggtatatagcaaa
ggagatgatgcggaaaaaacagaagttgtaccacctgaacatgaagataatagcttagaa
gatgcttatgattgtggtcaattagatgaaatatccggaaaagatcttccgctagagaaa
aataatcttgttaaggtcataactgcatcagatatcagtactggaaattataatattgag
gatgttgtccttcctatgcccggctctagaataatttatccaatgaatgaggttgctgat
gtttatcatgacatggcaaagaaggatggcatcagcttgacagagagtgtccataatatc
aaggaattttcaataaccagcatgactggaagctacaggcgtgtttttcagaagccaata
gattttcgatgggatttgctttcgtatacagatggaaatttagcattgtcggagacagat
atagacaaaattgccaaaacgaaacctgtgaacccagtcaaagaagagaatccaaccaat
ggaactgaaggcgaagagccattcaatcatctggaacaattagagagctttgaggatgag
aaaaagttctcaaccgatgataatgaggtggaggtttctagagaagccgagcatccacaa
gttcattctccacctgacttgaattctctggaacctcagaaagctctcaaattggccttc
acacttcctgcttcttgttatgccacaatggccatacgagagcttctcaagacatccact
tctgttgcattccacaagacacttaaccaataa
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