KEGG   Gossypium raimondii: 105804739
Entry
105804739         CDS       T04129                                 
Name
(RefSeq) uncharacterized protein LOC105804739 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
gra  Gossypium raimondii
Pathway
gra03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    105804739
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gra03400]
    105804739
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     105804739
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_DCAF4 Beta-prop_RIG_2nd RAWUL Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 105804739
NCBI-ProteinID: XP_012492919
UniProt: A0A0D2SSP7
LinkDB
Position
11:complement(9790786..9800441)
AA seq 763 aa
MHRVGSAGNNTNSNRPRKEKRLTYVLNDTADTKHCAGINCLAVLKSSASDGCDYLFTGSR
DGTLKRWALGENAATCSATFESHVDWVNDTVIAGDSTLVSCSSDTTLKTWNCLSEGTCTR
TFRQHSDYVTCLAAAEKNTNVVASGGLGGEVFVWDIEAAATPVSKSSDVVEDDCSNSMNG
SANLLPISSPRTISSSNSIRTHATQCHGYVPIAVKGHKESVYALAMNGSGSLLVSGGTEK
VVRVWDPRTGSKNMKLRGHADNIRALLLDSTGRYCLSGSSDSMIRLWDLGQQRCVHSYAV
HTDSVWALASTPTFSHVYSGGRDLSLYLTDLTTRESLLLCTKEQPILQLALHDDSIWVAT
TDSSVCRWPAEGRTPQNVFQRGGSFLAGNLSFSRARVSLEGSTPAPVYKEPIFTIPGTPA
IVQHEILNNRRHVLTKDAAGSVKLWEITRGVVIEDYGQVSFDKKKEQLFEMVSIPAWFTA
DTRLGCLSVHLDTPQCFTAEMYSVDLNITGKPEDDKVNLARETLKGLLVHWLAKRRQRHG
TQASANGDVVSGKDMTARSSAHSRIEVDGNAENDSLVYPPFEFSTVSPPSIITEGSQGGP
WRKKITELDATEDEKDFPLWVLDCVLNNRLPPREKTKCSFYLHPCEGSAVRILTQGKLSA
PRILRMHKVVNYVIEKLVLDKPIDSLNIDGTYAAGLGGQPQHSAGGEGSLRSGLKPWQKL
RPSIEILCNNQVLSPEMSLATVRAYIWKRPEDLVLNYRMIQGK
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgcaccgagtgggcagtgcagggaacaataccaattctaaccgcccacggaaagagaaa
aggttgacatatgtactgaatgataccgccgacacaaagcattgtgcaggcataaattgt
ttggctgtgctaaagtcatcagcctcggatgggtgcgactatcttttcactggtagccgt
gatggcacacttaagagatgggcacttggtgaaaatgctgccacatgctctgctacattt
gagtctcatgttgattgggtaaatgatactgttattgctggtgatagtacacttgtttca
tgctcatcagacactacattgaagacgtggaattgcttgtctgaaggaacttgcaccagg
actttccgtcaacactctgactatgttacatgtctagccgcagctgaaaaaaataccaat
gtggttgcctctgggggtcttggaggggaggtttttgtgtgggatattgaagctgcagca
actccagtctctaaatccagtgatgtagtggaagatgattgttccaacagtatgaatggt
tcggcaaatttgttaccgatatcaagtccgagaacaattagctcaagtaacagcattagg
acgcacgcaactcagtgtcatggatatgtccccattgctgtcaaaggtcacaaagaatcg
gtctatgcattggcaatgaatggtagtggctcccttcttgtctctggtggaactgagaag
gttgtgcgagtttgggatccaagaactggttcaaagaatatgaaactaagagggcatgca
gataacattagggctttgcttctggattctactggcagatattgtttgtcagggtcctcg
gattctatgatcaggctgtgggaccttggtcaacaacgctgtgtgcattcatatgctgtg
cacacagattctgtttgggcacttgcaagcaccccaacatttagtcatgtttatagtggt
ggtagagatctttctttatatctgacagacttgacaacaagagagagtcttttgctttgc
accaaggaacaaccaattttgcagttggcattgcatgatgatagtatatgggttgcaact
acagattcttcagtttgtaggtggcctgctgagggacggactcctcagaatgtcttccaa
agaggtggttcatttttggctggaaacttgtctttttcgagggcaagagtttcattagaa
gggtctaccccagcccctgtttataaagaaccaatctttaccattcctggaactccagca
attgttcagcatgaaattttaaataacagaaggcatgtattgacaaaggatgctgctggt
tcagtaaagctctgggagataaccaggggtgttgtgattgaggattatggacaggtttca
tttgacaagaaaaaggaacagctttttgagatggtaagcattcctgcatggttcactgcg
gatacccggcttggatgcttgtctgttcatttagacacgccccagtgctttactgcagag
atgtattctgtagatctgaacataactggcaagcctgaggatgataaggttaatctagct
cgtgaaacccttaaaggtcttttggttcattggttggccaaaagaaggcaaagacatggc
acccaggcttctgctaatggagatgttgtatcaggaaaagatatgactgccagaagttct
gctcattcaaggattgaggtagatggaaatgctgaaaatgactcattggtctatcctcct
ttcgagttttctactgtttcccctccctcaattattaccgagggttcccaaggaggtcct
tggagaaagaaaattactgaattggatgcaaccgaggatgagaaggacttccctttgtgg
gttttggattgtgtattaaataatcggctaccacctagagaaaaaaccaagtgcagcttc
tatcttcatccatgtgaaggttcagctgttcggatactgacacaaggaaagttaagtgct
cctcgcatattgagaatgcataaggttgttaattatgtcatagaaaagctggtgcttgac
aaaccaattgatagtttaaatatcgatgggacatatgctgctggacttggaggacaaccg
caacattcagcaggtggagagggatctcttcggtctggattgaagccttggcaaaagctt
cggccttctattgagattttatgcaataatcaggtactgtctccggagatgagcttagcc
actgtgcgggcttacatatggaagagacctgaggatttggtacttaattatagaatgatt
caaggcaagtga

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